In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach |
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|---|---|
| PubMed ID | 19406225 |
| Authors | "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y" |
| Journal | "Genomics |
| Volume | 94 |
| Pages | 125-131 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| eca-mir-107b | MI0012643 | 301 | 1 | 38999016 | 38999096 | + | High |
| eca-mir-1179 | MI0012644 | None | 1 | 95491143 | 95491228 | - | - |
| eca-mir-1244 | MI0012645 | None | chr1 | 12764826 | 12764896 | + | - |
| eca-mir-1282 | MI0012646 | None | 1 | 146749062 | 146749162 | + | - |
| eca-mir-1296 | MI0012647 | 7 | 1 | 52846588 | 52846679 | - | High |
| eca-mir-146b | MI0012648 | 4138 | 1 | 27882545 | 27882618 | - | High |
| eca-mir-1839 | MI0012649 | 129 | 1 | 92777727 | 92777786 | - | High |
| eca-mir-184 | MI0012650 | 1 | 1 | 116238555 | 116238624 | - | - |
| eca-mir-1892 | MI0012651 | None | 1 | 173319350 | 173319429 | - | - |
| eca-mir-190a | MI0012652 | 11 | 1 | 130513695 | 130513761 | - | High |
| eca-mir-1905a | MI0012653 | None | 1 | 90241852 | 90241919 | - | - |
| eca-mir-208a | MI0012655 | 0 | 1 | 163278769 | 163278851 | - | High |
| eca-mir-208b | MI0012656 | 0 | 1 | 163306871 | 163306947 | - | High |
| eca-mir-211 | MI0012657 | 169 | 1 | 109178753 | 109178839 | - | High |
| eca-mir-346 | MI0012658 | None | 1 | 84971760 | 84971854 | + | - |
| eca-mir-628a | MI0012659 | 26 | gb|PJAA01003623.1| | 40372 | 40466 | + | High |
| eca-mir-7-1 | MI0012661 | 5 | 1 | 95487869 | 95487928 | - | High |
| eca-mir-124-1 | MI0012662 | 0 | 2 | 58293859 | 58293926 | - | High |
| eca-mir-1302-1 | MI0012663 | None | 2 | 43700145 | 43700202 | - | - |
| eca-mir-147b | MI0012664 | 0 | 2 | 104654559 | 104654638 | + | - |
| eca-mir-200a | MI0012665 | 3 | 2 | 48713802 | 48713891 | - | High |
| eca-mir-200b | MI0012666 | 3 | 2 | 48714468 | 48714536 | - | High |
| eca-mir-302a | MI0012667 | None | 2 | 114120747 | 114120814 | + | High |
| eca-mir-302b | MI0012668 | None | 2 | 114120437 | 114120512 | + | High |
| eca-mir-302c | MI0012669 | None | 2 | 114120575 | 114120642 | + | High |
| eca-mir-302d | MI0012670 | None | 2 | 114120907 | 114120974 | + | High |
| eca-mir-30c-1 | MI0012671 | 1008 | 2 | 17480015 | 17480103 | - | High |
| eca-mir-30e | MI0012672 | 3657 | 2 | 17482937 | 17483028 | - | High |
| eca-mir-34a | MI0012673 | 6 | 2 | 42156753 | 42156815 | + | High |
| eca-mir-367 | MI0012674 | None | 2 | 114121036 | 114121103 | + | - |
| eca-mir-429 | MI0012675 | 1 | 2 | 48712423 | 48712489 | - | High |
| eca-mir-492-1 | MI0012676 | None | 7 | 56776687 | 56776752 | + | - |
| eca-mir-551a | MI0012677 | 1 | 2 | 46757810 | 46757871 | + | High |
| eca-mir-598 | MI0012678 | None | 2 | 59456983 | 59457055 | - | - |
| eca-mir-761 | MI0012679 | None | 2 | 7442911 | 7442973 | + | - |
| eca-mir-1261 | MI0012680 | 0 | 3 | 92401001 | 92401085 | + | - |
| eca-mir-138a | MI0012681 | 2 | 3 | 9900381 | 9900464 | + | High |
| eca-mir-140 | MI0012682 | 43 | 3 | 20601709 | 20601769 | + | High |
| eca-mir-218-1 | MI0012683 | 9 | 3 | 105377070 | 105377131 | - | Medium |
| eca-mir-328 | MI0012684 | 9 | 3 | 18363106 | 18363176 | - | High |
| eca-mir-684 | MI0012685 | None | 3 | 44922346 | 44922431 | - | - |
| eca-mir-95 | MI0012686 | 51 | 3 | 117518899 | 117518979 | - | High |
| eca-mir-129a | MI0012687 | 6 | 4 | 83490174 | 83490246 | + | High |
| eca-mir-1302b-2 | MI0012688 | 0 | 4 | 60102270 | 60102403 | - | - |
| eca-mir-148a | MI0012689 | 11345 | 4 | 57356762 | 57356829 | - | High |
| eca-mir-153-1 | MI0012690 | 1 | 4 | 107916660 | 107916726 | - | High |
| eca-mir-182 | MI0012691 | 79 | 4 | 84571173 | 84571247 | - | High |
| eca-mir-183 | MI0012692 | 4 | 4 | 84575894 | 84575962 | - | High |
| eca-mir-196b-1 | MI0012693 | 1 | 4 | 58381198 | 58381281 | - | High |
| eca-mir-29a | MI0012694 | 338 | 4 | 85442662 | 85442726 | - | High |
| eca-mir-29b | MI0012695 | 13 | 4 | 85443041 | 85443121 | - | High |
| eca-mir-335 | MI0012696 | 79 | 4 | 85156067 | 85156141 | + | High |
| eca-mir-489 | MI0012697 | None | 4 | 37175516 | 37175600 | - | - |
| eca-mir-490 | MI0012698 | 16 | 4 | 90886530 | 90886598 | + | High |
| eca-mir-592 | MI0012699 | 38 | 4 | 82508976 | 82509058 | - | - |
| eca-mir-653 | MI0012700 | None | 4 | 37174800 | 37174884 | - | High |
| eca-mir-671 | MI0012701 | 19 | 4 | 102950767 | 102950850 | + | High |
| eca-mir-96 | MI0012702 | 0 | 4 | 84575663 | 84575740 | - | - |
| eca-mir-101-1 | MI0012703 | 843 | 5 | 92613111 | 92613169 | + | High |
| eca-mir-135b | MI0012704 | 21 | 5 | 1907506 | 1907594 | - | High |
| eca-mir-137 | MI0012705 | 0 | 5 | 64453422 | 64453494 | + | High |
| eca-mir-15b | MI0012706 | 54 | 19 | 3408021 | 3408084 | - | High |
| eca-mir-16-1 | MI0012707 | 3536 | 19 | 3407863 | 3407943 | - | High |
| eca-mir-186 | MI0012708 | 3653 | 5 | 87758212 | 87758282 | + | High |
| eca-mir-1905b | MI0012709 | None | 5 | 38698750 | 38698813 | - | - |
| eca-mir-190b | MI0012710 | 11 | 5 | 40110320 | 40110399 | + | High |
| eca-mir-197 | MI0012711 | 34 | 5 | 55117031 | 55117105 | - | High |
| eca-mir-199a | MI0012712 | 8479 | 5 | 8123279 | 8123357 | - | High |
| eca-mir-205 | MI0012713 | 13 | 5 | 26052124 | 26052192 | - | High |
| eca-mir-214 | MI0012714 | 287 | 5 | 8117501 | 8117565 | - | High |
| eca-mir-29b-2 | MI0012715 | 14 | 5 | 27511140 | 27511220 | + | High |
| eca-mir-29c | MI0012716 | 66 | 5 | 27511696 | 27511783 | + | High |
| eca-mir-29c-2 | MI0012717 | 66 | 5 | 27608987 | 27609074 | + | High |
| eca-mir-488 | MI0012718 | 7 | 5 | 12186547 | 12186629 | - | High |
| eca-mir-92b | MI0012719 | 225 | 5 | 39317356 | 39317430 | - | High |
| eca-mir-9a | MI0012720 | 17 | 5 | 38435547 | 38435625 | + | High |
| eca-mir-1291a | MI0012721 | 0 | chr6 | 66544958 | 66545044 | - | Low |
| eca-mir-1302d-4 | MI0012722 | None | 6 | 16936672 | 16936775 | - | - |
| eca-mir-141 | MI0012723 | 3 | 6 | 35439079 | 35439150 | + | High |
| eca-mir-148b | MI0012724 | 219 | 6 | 72050081 | 72050163 | + | High |
| eca-mir-149 | MI0012725 | 16 | 6 | 25920878 | 25920966 | + | Medium |
| eca-mir-153-2 | MI0012726 | 1 | 6 | 8602168 | 8602236 | - | High |
| eca-mir-200c | MI0012727 | 0 | 6 | 35438670 | 35438733 | + | High |
| eca-mir-26a | MI0012728 | 21693 | 6 | 76295577 | 76295660 | - | High |
| eca-mir-615 | MI0012729 | 9 | 6 | 71801138 | 71801234 | + | High |
| eca-mir-763 | MI0012730 | None | 6 | 82584156 | 82584275 | + | - |
| eca-let-7a | MI0012731 | 14612 | gb|PJAA01002884.1| | 30561 | 30632 | - | High |
| eca-mir-100 | MI0012732 | 2626 | gb|PJAA01002884.1| | 36043 | 36097 | - | High |
| eca-mir-125b-1 | MI0012733 | 2403 | 7 | 30143988 | 30144075 | - | High |
| eca-mir-1302c-5 | MI0012734 | None | 7 | 90062343 | 90062464 | - | - |
| eca-mir-139 | MI0012735 | 10 | 7 | 73259101 | 73259163 | + | High |
| eca-mir-1905c | MI0012736 | None | 7 | 900125 | 900207 | + | - |
| eca-mir-23a | MI0012737 | 192 | 7 | 46233009 | 46233081 | + | High |
| eca-mir-24-1 | MI0012738 | 309 | 7 | 46233355 | 46233422 | + | High |
| eca-mir-27a | MI0012739 | 300 | 7 | 46233206 | 46233282 | + | High |
| eca-mir-326 | MI0012740 | 0 | 7 | 70997165 | 70997259 | + | High |
| eca-mir-34b | MI0012741 | 225 | 7 | 20597079 | 20597162 | + | High |
| eca-mir-34c | MI0012742 | 3580 | 7 | 20597658 | 20597734 | + | High |
| eca-mir-492-2 | MI0012743 | None | 7 | 56776688 | 56776749 | + | - |
| eca-mir-7-2 | MI0012744 | 5 | 7 | 3377222 | 3377305 | + | High |
| eca-mir-708 | MI0012745 | 14 | 7 | 67413073 | 67413165 | + | High |
| eca-mir-1-1 | MI0012746 | 13 | 8 | 42946236 | 42946313 | + | High |
| eca-mir-122 | MI0012747 | 2 | 8 | 79152582 | 79152647 | + | High |
| eca-mir-130b | MI0012748 | 5 | 8 | 5383817 | 5383897 | + | High |
| eca-mir-133a | MI0012749 | 210 | 8 | 42949628 | 42949695 | + | High |
| eca-mir-1597 | MI0012750 | None | 8 | 50004391 | 50004463 | - | - |
| eca-mir-187 | MI0012751 | 0 | 8 | 59511287 | 59511347 | - | High |
| eca-mir-301b | MI0012752 | 2 | 8 | 5383486 | 5383582 | + | High |
| eca-mir-703 | MI0012753 | 1 | chr4 | 34894261 | 34894324 | - | Medium |
| eca-mir-1204 | MI0012754 | None | 9 | 71466250 | 71466316 | + | - |
| eca-mir-124-2 | MI0012755 | None | 9 | 21299679 | 21299734 | - | - |
| eca-mir-151 | MI0012756 | 7136 | 9 | 81983419 | 81983487 | - | High |
| eca-mir-30b | MI0012757 | 289 | 9 | 77314900 | 77314957 | - | High |
| eca-mir-30d | MI0012758 | 5295 | 9 | 77319227 | 77319297 | - | High |
| eca-let-7e | MI0012759 | 909 | 10 | 21666211 | 21666289 | + | High |
| eca-mir-125a | MI0012760 | 5165 | 10 | 21666717 | 21666784 | + | High |
| eca-mir-1302e-6 | MI0012761 | None | 10 | 50164494 | 50164545 | - | - |
| eca-mir-150 | MI0012762 | 67 | 10 | 19592431 | 19592495 | - | High |
| eca-mir-330 | MI0012763 | 8 | 10 | 16353450 | 16353511 | - | High |
| eca-mir-371 | MI0012764 | 1 | 10 | 23262827 | 23262886 | + | High |
| eca-mir-769a | MI0012765 | None | 10 | 16822609 | 16822687 | - | - |
| eca-mir-769b | MI0012766 | None | 10 | 16638859 | 16638951 | + | - |
| eca-mir-99b | MI0012767 | 3009 | 10 | 21666034 | 21666103 | + | High |
| eca-mir-10a | MI0012768 | 1619 | 11 | 24703522 | 24703631 | - | High |
| eca-mir-1180 | MI0012769 | 13 | 11 | 59580505 | 59580574 | + | - |
| eca-mir-132 | MI0012770 | 14 | 11 | 45961566 | 45961631 | - | High |
| eca-mir-142 | MI0012771 | 790 | 11 | 32880912 | 32880975 | - | High |
| eca-mir-144 | MI0012772 | 12 | 11 | 43072035 | 43072100 | - | High |
| eca-mir-193a | MI0012773 | 5 | 11 | 41106489 | 41106569 | - | High |
| eca-mir-195 | MI0012774 | 783 | 11 | 50388621 | 50388714 | - | High |
| eca-mir-196a | MI0012775 | 0 | 11 | 24755448 | 24755517 | - | High |
| eca-mir-21 | MI0012776 | 10149 | 11 | 34161377 | 34161448 | + | High |
| eca-mir-212 | MI0012777 | 2 | 11 | 45961979 | 45962038 | - | High |
| eca-mir-22 | MI0012778 | 10606 | 11 | 45699954 | 45700038 | - | High |
| eca-mir-301a | MI0012779 | 250 | 11 | 33590193 | 33590278 | - | High |
| eca-mir-324 | MI0012780 | 9 | 11 | 50583599 | 50583681 | - | High |
| eca-mir-338 | MI0012781 | 8 | 11 | 1969260 | 1969318 | + | High |
| eca-mir-33b | MI0012782 | 0 | 11 | 60435456 | 60435511 | + | High |
| eca-mir-365-1 | MI0012783 | 8 | 11 | 41093763 | 41093828 | - | Medium |
| eca-mir-423 | MI0012784 | 764 | 11 | 44106238 | 44106300 | + | High |
| eca-mir-451 | MI0012785 | 410 | 11 | 43071862 | 43071933 | - | High |
| eca-mir-454 | MI0012786 | 18 | 11 | 33581059 | 33581127 | - | High |
| eca-mir-497 | MI0012787 | 233 | 11 | 50388945 | 50389003 | - | Medium |
| eca-mir-632 | MI0012788 | None | 11 | 40467921 | 40467985 | - | - |
| eca-mir-129b | MI0012789 | 12 | 12 | 8563202 | 8563275 | + | High |
| eca-mir-130a | MI0012790 | 461 | 12 | 21235999 | 21236062 | + | High |
| eca-mir-1902 | MI0012791 | 0 | 12 | 411920 | 411999 | - | - |
| eca-mir-192 | MI0012792 | 92 | 12 | 28723076 | 28723136 | - | Medium |
| eca-mir-194a | MI0012793 | 3 | 12 | 28723267 | 28723351 | - | High |
| eca-mir-493a | MI0012794 | None | 12 | 10419116 | 10419185 | - | - |
| eca-mir-670 | MI0012795 | 3 | 12 | 8541532 | 8541631 | + | - |
| eca-mir-675 | MI0012796 | 2 | 12 | 34335950 | 34336022 | - | High |
| eca-mir-106b | MI0012797 | 31 | 13 | 8115359 | 8115417 | - | High |
| eca-mir-1302e-7 | MI0012798 | None | 13 | 36492682 | 36492736 | - | - |
| eca-mir-1842 | MI0012799 | 4 | 13 | 41809742 | 41809801 | + | High |
| eca-mir-193b | MI0012800 | 34 | 13 | 31850707 | 31850775 | - | High |
| eca-mir-25 | MI0012801 | 1113 | 13 | 8114914 | 8114997 | - | High |
| eca-mir-365-2 | MI0012802 | 8 | 13 | 31845857 | 31845943 | - | Medium |
| eca-mir-590 | MI0012803 | 7 | 13 | 12015281 | 12015361 | + | High |
| eca-mir-93 | MI0012804 | 334 | 13 | 8115133 | 8115191 | - | High |
| eca-mir-107a | MI0012805 | 682 | 14 | 11601950 | 11602011 | + | High |
| eca-mir-1271a | MI0012806 | 169 | 14 | 4978546 | 4978602 | - | Medium |
| eca-mir-143 | MI0012807 | 129412 | 14 | 27744250 | 27744313 | - | High |
| eca-mir-145 | MI0012808 | 1058 | 14 | 27742822 | 27742891 | - | High |
| eca-mir-146a | MI0012809 | 773 | 14 | 18375048 | 18375112 | - | High |
| eca-mir-218-2 | MI0012810 | 9 | 14 | 11396076 | 11396138 | + | High |
| eca-mir-340 | MI0012811 | 930 | 14 | 1765476 | 1765542 | + | High |
| eca-mir-378 | MI0012812 | 229 | 14 | 27496581 | 27496646 | - | High |
| eca-mir-874 | MI0012813 | 24 | 14 | 38023413 | 38023472 | + | High |
| eca-mir-9a-2 | MI0012814 | 17 | 14 | 78864835 | 78864912 | + | High |
| eca-mir-1301 | MI0012815 | 3 | 15 | 71646910 | 71646981 | + | High |
| eca-mir-1461 | MI0012816 | None | 15 | 45348561 | 45348616 | - | - |
| eca-mir-216a | MI0012817 | None | 15 | 45359145 | 45359202 | + | - |
| eca-mir-216b | MI0012818 | 1 | 15 | 45348546 | 45348631 | + | - |
| eca-mir-217 | MI0012819 | None | 15 | 45366335 | 45366391 | + | - |
| eca-let-7g | MI0012820 | 1914 | 16 | 36958024 | 36958111 | + | High |
| eca-mir-128-1 | MI0012821 | 128 | 16 | 50693927 | 50694010 | - | High |
| eca-mir-1289 | MI0012822 | None | 16 | 28937047 | 28937134 | + | - |
| eca-mir-135a | MI0012823 | 6 | 16 | 36933008 | 36933067 | + | High |
| eca-mir-138b | MI0012824 | 2 | 16 | 43830202 | 43830260 | - | High |
| eca-mir-191a | MI0012825 | 14817 | 16 | 39558141 | 39558214 | + | High |
| eca-mir-26a-2 | MI0012826 | 21686 | 16 | 48848856 | 48848932 | - | High |
| eca-mir-711 | MI0012827 | None | 16 | 39949643 | 39949703 | + | - |
| eca-mir-885 | MI0012828 | None | 16 | 8057788 | 8057861 | + | High |
| eca-mir-15a | MI0012829 | 135 | 17 | 21041772 | 21041828 | + | High |
| eca-mir-16-2 | MI0012830 | 3537 | 17 | 21041912 | 21041974 | + | High |
| eca-mir-17 | MI0012831 | 150 | 17 | 61685042 | 61685100 | + | High |
| eca-mir-18a | MI0012832 | 9 | 17 | 61685182 | 61685242 | + | High |
| eca-mir-19a | MI0012833 | 17 | 17 | 61685318 | 61685399 | + | High |
| eca-mir-19b-1 | MI0012834 | 211 | 17 | 61685628 | 61685691 | + | High |
| eca-mir-20a | MI0012835 | 63 | 17 | 61685489 | 61685559 | + | High |
| eca-mir-92a | MI0012836 | 3928 | 17 | 61685746 | 61685806 | + | High |
| eca-mir-10b | MI0012837 | 342838 | 18 | 54645765 | 54645832 | + | High |
| eca-mir-128-2 | MI0012838 | 196 | 18 | 19559607 | 19559676 | + | - |
| eca-mir-1248 | MI0012839 | 0 | chr19 | 24793833 | 24793925 | + | Medium |
| eca-mir-28 | MI0012840 | 2668 | 19 | 28810600 | 28810685 | + | High |
| eca-mir-551b | MI0012841 | 0 | 19 | 11547228 | 11547289 | + | High |
| eca-mir-568 | MI0012842 | None | 19 | 46490826 | 46490886 | + | - |
| eca-mir-1291b | MI0012843 | None | chr20 | 7735143 | 7735198 | - | - |
| eca-mir-133b | MI0012844 | 3 | 20 | 50841419 | 50841479 | + | High |
| eca-mir-206-2 | MI0012845 | None | 20 | 50837308 | 50837376 | + | - |
| eca-mir-219a | MI0012846 | 4 | 20 | 34558889 | 34558975 | + | High |
| eca-mir-30c-2 | MI0012849 | 994 | 20 | 63868915 | 63868974 | - | High |
| eca-mir-1898 | MI0012850 | None | 21 | 32969337 | 32969397 | + | - |
| eca-mir-449a | MI0012851 | 1815 | 21 | 17771326 | 17771385 | + | High |
| eca-mir-582 | MI0012852 | 1 | 21 | 13877217 | 13877284 | + | High |
| eca-mir-1-2 | MI0012853 | 13 | 22 | 49406936 | 49407011 | + | High |
| eca-mir-103 | MI0012854 | 717 | 22 | 19479868 | 19479945 | - | High |
| eca-mir-1255b | MI0012855 | None | 22 | 30748291 | 30748353 | - | - |
| eca-mir-133a-2 | MI0012856 | 210 | 22 | 49417696 | 49417763 | + | High |
| eca-mir-296 | MI0012857 | 4 | 22 | 46180494 | 46180571 | - | High |
| eca-mir-499 | MI0012858 | 3 | 22 | 26712903 | 26713025 | + | High |
| eca-let-7d-1 | MI0012859 | 419 | 23 | 53957801 | 53957887 | - | High |
| eca-let-7f | MI0012860 | 7084 | 23 | 53959741 | 53959827 | - | High |
| eca-mir-101-2 | MI0012861 | 1079 | 23 | 25728392 | 25728463 | + | High |
| eca-mir-204b | MI0012862 | 763 | 23 | 19459719 | 19459786 | + | High |
| eca-mir-23b | MI0012863 | 268 | 23 | 2132611 | 2132684 | - | High |
| eca-mir-24-2 | MI0012864 | 293 | 23 | 2131864 | 2131931 | - | High |
| eca-mir-27b | MI0012865 | 10018 | 23 | 2132383 | 2132455 | - | High |
| eca-mir-31 | MI0012866 | 4 | 23 | 40089698 | 40089764 | - | High |
| eca-mir-491 | MI0012867 | 0 | 23 | 39378586 | 39378669 | + | High |
| eca-mir-544b | MI0012868 | 0 | 23 | 5538085 | 5538160 | + | - |
| eca-mir-7-3 | MI0012869 | 6 | 23 | 6940625 | 6940712 | - | High |
| eca-mir-872 | MI0012870 | 25 | 23 | 44521279 | 44521358 | + | High |
| eca-mir-873 | MI0012871 | 7 | 23 | 46232409 | 46232485 | - | High |
| eca-mir-876 | MI0012872 | 0 | 23 | 46211997 | 46212077 | - | High |
| eca-mir-1185 | MI0012873 | 5 | 24 | 43352983 | 43353068 | + | High |
| eca-mir-1193 | MI0012874 | 2 | 24 | 43341207 | 43341327 | + | Medium |
| eca-mir-1197 | MI0012875 | 3 | 24 | 43336743 | 43336862 | + | High |
| eca-mir-127 | MI0012876 | 17988 | 24 | 43185821 | 43185890 | + | High |
| eca-mir-134 | MI0012877 | 13 | 24 | 43363877 | 43363947 | + | High |
| eca-mir-136 | MI0012878 | 1329 | 24 | 43187501 | 43187562 | + | High |
| eca-mir-154a | MI0012879 | 6 | 24 | 43368795 | 43368858 | + | High |
| eca-mir-299 | MI0012880 | 86 | 24 | 43334993 | 43335055 | + | High |
| eca-mir-323a | MI0012881 | 16 | 24 | 43336934 | 43337019 | + | High |
| eca-mir-329a | MI0012882 | 2 | 24 | 43337982 | 43338079 | + | High |
| eca-mir-337 | MI0012883 | 1 | 24 | 43177970 | 43178061 | + | High |
| eca-mir-342 | MI0012884 | 126 | 24 | 42491171 | 42491269 | + | High |
| eca-mir-345 | MI0012885 | 9 | 24 | 42657498 | 42657593 | + | High |
| eca-mir-369 | MI0012886 | 71 | 24 | 43374565 | 43374634 | + | High |
| eca-mir-370 | MI0012887 | 17 | 24 | 43212455 | 43212529 | + | High |
| eca-mir-376a-1 | MI0012888 | 14 | 24 | 43350866 | 43350933 | + | High |
| eca-mir-376b | MI0012889 | 4 | 24 | 43350488 | 43350569 | + | High |
| eca-mir-376c | MI0012890 | 6 | 24 | 43349736 | 43349801 | + | High |
| eca-mir-377 | MI0012891 | 20 | 24 | 43371371 | 43371439 | + | High |
| eca-mir-379 | MI0012892 | 111 | 24 | 43333273 | 43333339 | + | High |
| eca-mir-380 | MI0012893 | 78 | 24 | 43336222 | 43336282 | + | High |
| eca-mir-381 | MI0012894 | 20 | 24 | 43354686 | 43354760 | + | High |
| eca-mir-382 | MI0012895 | 17 | 24 | 43363494 | 43363569 | + | High |
| eca-mir-409 | MI0012896 | 1292 | 24 | 43374266 | 43374344 | + | High |
| eca-mir-410a | MI0012897 | 426 | 24 | 43374896 | 43374969 | + | High |
| eca-mir-411 | MI0012898 | 4889 | 24 | 43334525 | 43334606 | + | High |
| eca-mir-412 | MI0012899 | 57 | 24 | 43374416 | 43374495 | + | High |
| eca-mir-431 | MI0012900 | 26 | 24 | 43183836 | 43183924 | + | Medium |
| eca-mir-432 | MI0012901 | 148 | 24 | 43187301 | 43187389 | + | Medium |
| eca-mir-433 | MI0012902 | 10 | 24 | 43184711 | 43184834 | + | High |
| eca-mir-485 | MI0012903 | 31 | 24 | 43364618 | 43364690 | + | High |
| eca-mir-487a | MI0012904 | 38 | 24 | 43360624 | 43360703 | + | High |
| eca-mir-487b | MI0012905 | 98 | 24 | 43355152 | 43355235 | + | High |
| eca-mir-493b | MI0012906 | 46 | 24 | 43167633 | 43167721 | + | High |
| eca-mir-494 | MI0012907 | 13 | 24 | 43340801 | 43340881 | + | High |
| eca-mir-495 | MI0012908 | 16 | 24 | 43344716 | 43344797 | + | High |
| eca-mir-496 | MI0012909 | 3 | 24 | 43369622 | 43369724 | + | High |
| eca-mir-539 | MI0012910 | 70 | 24 | 43355997 | 43356074 | + | High |
| eca-mir-541 | MI0012911 | 6 | 24 | 43373346 | 43373429 | + | High |
| eca-mir-543 | MI0012912 | 8 | 24 | 43342877 | 43342948 | + | High |
| eca-mir-544-2 | MI0012913 | 1 | 24 | 43357324 | 43357413 | + | High |
| eca-mir-655 | MI0012914 | 1 | 24 | 43358226 | 43358322 | + | High |
| eca-mir-656 | MI0012915 | 29 | 24 | 43375643 | 43375720 | + | High |
| eca-mir-758 | MI0012916 | 28 | 24 | 43337229 | 43337313 | + | High |
| eca-mir-770 | MI0012917 | None | 24 | 43150327 | 43150421 | + | High |
| eca-mir-889 | MI0012918 | 187 | 24 | 43356572 | 43356649 | + | High |
| eca-mir-126 | MI0012919 | 2314 | 25 | 37944583 | 37944655 | - | High |
| eca-mir-181a-1 | MI0012920 | 19553 | 25 | 29260007 | 29260116 | + | High |
| eca-mir-181b-1 | MI0012921 | 652 | 25 | 29261286 | 29261374 | + | High |
| eca-mir-199b | MI0012922 | 7374 | 25 | 32139033 | 32139101 | - | High |
| eca-mir-219b | MI0012923 | 0 | 25 | 32252430 | 32252526 | - | High |
| eca-mir-32 | MI0012924 | 6 | 25 | 14763851 | 14763920 | - | High |
| eca-let-7c-1 | MI0012925 | 3483 | 26 | 16009461 | 16009531 | + | High |
| eca-mir-125b-2 | MI0012926 | 2897 | 26 | 16052911 | 16052980 | + | High |
| eca-mir-155 | MI0012927 | 266 | 26 | 23977038 | 23977102 | + | High |
| eca-mir-802 | MI0012928 | None | 26 | 33335402 | 33335494 | + | High |
| eca-mir-99a-2 | MI0012929 | 2668 | 26 | 16008719 | 16008799 | + | High |
| eca-mir-383 | MI0012930 | 37 | 27 | 18220077 | 18220149 | - | High |
| eca-mir-486 | MI0012931 | 5818 | 27 | 3721484 | 3721549 | + | High |
| eca-let-7a-2 | MI0012932 | 14634 | 28 | 43148191 | 43148264 | + | High |
| eca-mir-135a-2 | MI0012933 | 7 | 28 | 23312799 | 23312898 | + | High |
| eca-mir-331 | MI0012934 | 9 | 28 | 21450572 | 21450663 | + | High |
| eca-mir-33a | MI0012935 | 1 | 28 | 39390962 | 39391030 | + | High |
| eca-mir-181a-2 | MI0012936 | 19479 | 30 | 27734331 | 27734440 | - | High |
| eca-mir-194b | MI0012937 | 3 | 30 | 10716097 | 10716181 | - | - |
| eca-mir-215 | MI0012938 | 5 | 30 | 10715793 | 10715902 | - | High |
| eca-mir-350 | MI0012939 | 6 | 30 | 2087460 | 2087555 | + | High |
| eca-mir-664 | MI0012940 | 11 | 30 | 10799032 | 10799105 | - | High |
| eca-mir-105a | MI0012941 | 1 | X | 125118240 | 125118320 | - | - |
| eca-mir-106a | MI0012942 | 96 | X | 110759183 | 110759263 | - | High |
| eca-mir-1264 | MI0012943 | 1 | X | 94830798 | 94830866 | + | - |
| eca-mir-1298 | MI0012944 | 45 | X | 94904622 | 94904732 | + | High |
| eca-mir-1468 | MI0012945 | 98 | X | 49538666 | 49538751 | - | - |
| eca-mir-188 | MI0012946 | 5 | X | 41473764 | 41473831 | + | High |
| eca-mir-18b | MI0012947 | 3 | X | 110759033 | 110759091 | - | High |
| eca-mir-1912 | MI0012948 | 1 | X | 94829670 | 94829749 | + | - |
| eca-mir-19b-2 | MI0012949 | 212 | X | 110758655 | 110758750 | - | High |
| eca-mir-20b | MI0012950 | 63 | X | 110758793 | 110758861 | - | High |
| eca-mir-221 | MI0012951 | 94 | X | 38513896 | 38514005 | - | High |
| eca-mir-222 | MI0012952 | 83 | X | 38514675 | 38514784 | - | High |
| eca-mir-223 | MI0012953 | 13 | X | 51587749 | 51587852 | + | High |
| eca-mir-224 | MI0012954 | 0 | X | 124794220 | 124794300 | - | High |
| eca-mir-361 | MI0012956 | 132 | X | 68955681 | 68955751 | - | High |
| eca-mir-362 | MI0012957 | 20 | X | 41478742 | 41478807 | + | High |
| eca-mir-363 | MI0012958 | 843 | X | 110758365 | 110758439 | - | High |
| eca-mir-374a | MI0012959 | 269 | X | 58620768 | 58620839 | - | High |
| eca-mir-374b | MI0012960 | 9 | X | 58556190 | 58556261 | - | Medium |
| eca-mir-384 | MI0012961 | 5 | X | 60255703 | 60255790 | - | High |
| eca-mir-421 | MI0012962 | 5 | X | 58556025 | 58556103 | - | High |
| eca-mir-424 | MI0012963 | 402 | X | 111021443 | 111021540 | - | High |
| eca-mir-448 | MI0012964 | 0 | X | 94994774 | 94994882 | + | - |
| eca-mir-450a | MI0012965 | 126 | X | 111015388 | 111015478 | - | High |
| eca-mir-450b | MI0012966 | 572 | X | 111015225 | 111015303 | - | High |
| eca-mir-450c | MI0012967 | 196 | X | 111015523 | 111015611 | - | High |
| eca-mir-500-1 | MI0012968 | 77 | X | 41478201 | 41478284 | + | High |
| eca-mir-500-2 | MI0012969 | 76 | X | 41480016 | 41480099 | + | High |
| eca-mir-501 | MI0012970 | 58 | X | 41479481 | 41479564 | + | High |
| eca-mir-502 | MI0012971 | 61 | X | 41482322 | 41482401 | + | High |
| eca-mir-503 | MI0012972 | 28 | X | 111021114 | 111021184 | - | High |
| eca-mir-504 | MI0012973 | 2 | X | 114357336 | 114357418 | - | High |
| eca-mir-505 | MI0012974 | 13 | X | 115406712 | 115406795 | - | High |
| eca-mir-507a | MI0012975 | 38 | X | 120853637 | 120853731 | - | - |
| eca-mir-508 | MI0012976 | 327 | X | 120863509 | 120863625 | - | High |
| eca-mir-509a | MI0012977 | 607 | X | 120886540 | 120886637 | - | High |
| eca-mir-514 | MI0012978 | 63 | X | 120891662 | 120891750 | - | - |
| eca-mir-532 | MI0012979 | 331 | X | 41473377 | 41473466 | + | High |
| eca-mir-542 | MI0012980 | 260 | X | 111016311 | 111016396 | - | High |
| eca-mir-545 | MI0012981 | 22 | X | 58620584 | 58620689 | - | High |
| eca-mir-652 | MI0012982 | 7 | X | 90969671 | 90969768 | + | High |
| eca-mir-660 | MI0012983 | 278 | X | 41481445 | 41481541 | + | High |
| eca-mir-672 | MI0012984 | None | X | 59034630 | 59034729 | - | - |
| eca-mir-764 | MI0012985 | None | X | 94818216 | 94818324 | + | - |
| eca-mir-767 | MI0012986 | 15 | X | 125119719 | 125119826 | - | High |
| eca-mir-92a-2 | MI0012987 | 3957 | X | 110758524 | 110758598 | - | High |
| eca-mir-98 | MI0012988 | 258 | X | 44906078 | 44906196 | + | High |