Stem-loop eca-mir-763

Accession

MI0012730

Description

Equus caballus eca-mir-763 precursor miRNA

Literature search

1 open access papers mention eca-mir-763
(1 sentences)

Sequence

aaugacggaggugcaggcauuuccugaggauuaaugaCCAGCUGGGAGGAACCAGUGGCccuuggcucugccucccggccagccauuaauuccaaggaaaugucuuuugcugaagucguu
((((((...((((.(((((((((((..(((((((((.(..(((((((((...(((.((((...))))))))))))))))..).)))))))))..)))))))))))..))))...))))))

Structure

      gga    -c           ga         a CA         AAC   U    c 
aaugac   ggug  aggcauuuccu  ggauuaaug C  GCUGGGAGG   CAG GGCc  
||||||   ||||  |||||||||||  ||||||||| |  |||||||||   ||| |||| u
uugcug   ucgu  ucuguaaagga  cuuaauuac g  cggcccucc   guc ucgg  
      aag    uu           ac         c ac         ---   -    u 

Annotation confidence Not enough data

Genome context

chr6: 81420420-81420539 [+]

Mature eca-miR-763

• Accession: MIMAT0012978
• Description: Equus caballus eca-miR-763 mature miRNA
• Sequence: 38 - CCAGCUGGGAGGAACCAGUGGC - 59
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131