Stem-loop eca-mir-384

Accession

MI0012961

Description

Equus caballus eca-mir-384 precursor miRNA

Literature search

2 open access papers mention eca-mir-384
(4 sentences)

Sequence

639 reads, 20.0 reads per million, 50 experiments

uguuaaaucaggaguUGUAAACAAUUCCUAGGCAAUGUguauaauguuuguaagucAUUCCUAGAAAUUGUUCACAAUgccuguaaca
(((((...((((.(((((.(((((((.(((((.((((..(((((...)))))...))))))))).))))))).))))).)))))))))

Structure

     aau    a     A       C     C    -Ug     u 
uguua   cagg guUGU AACAAUU CUAGG AAUG   uauaa  
|||||   |||| ||||| ||||||| ||||| ||||   ||||| g
acaau   gucc UAACA UUGUUAA GAUCC UUAc   auguu  
     ---    g     C       A     -    uga     u 

Annotation confidence High

Genome context

X: 60255703-60255790 [-]

Mature eca-miR-384-5p

• Accession: MIMAT0051489
• Description: Equus caballus eca-miR-384-5p mature miRNA
• Sequence: 16 - UGUAAACAAUUCCUAGGCAAUGU - 38
• Evidence: not_experimental

Mature eca-miR-384-3p

• Accession: MIMAT0013215
• Description: Equus caballus eca-miR-384-3p mature miRNA
• Sequence: 57 - AUUCCUAGAAAUUGUUCACAAU - 78
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131