Stem-loop eca-mir-186

Accession

MI0012708

Description

Equus caballus eca-mir-186 precursor miRNA

Literature search

7 open access papers mention eca-mir-186
(10 sentences)

Sequence

3147407 reads, 3756.0 reads per million, 234 experiments

acuuucCAAAGAAUUCUCCUUUUGGGCUUucugauuuuauuuuaagcCCAAAGGUGAAUUUUUUGGGAagu
((((((((((((((((.(((((.((((((..............))))))))))).))))))))))))))))

Structure

                U     U      ucugau 
acuuucCAAAGAAUUC CCUUU GGGCUU      u
|||||||||||||||| ||||| ||||||       
ugaAGGGUUUUUUAAG GGAAA CCcgaa      u
                U     -      uuuuau 

Annotation confidence High

Genome context

5: 87758212-87758282 [+]

Mature eca-miR-186-5p

• Accession: MIMAT0012956
• Description: Equus caballus eca-miR-186-5p mature miRNA
• Sequence: 7 - CAAAGAAUUCUCCUUUUGGGCUU - 29
• Evidence: not_experimental

Mature eca-miR-186-3p

• Accession: MIMAT0051345
• Description: Equus caballus eca-miR-186-3p mature miRNA
• Sequence: 48 - CCAAAGGUGAAUUUUUUGGGA - 68
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131