Stem-loop eca-mir-10b

Accession

MI0012837

Description

Equus caballus eca-mir-10b precursor miRNA

Literature search

9 open access papers mention eca-mir-10b
(10 sentences)

Sequence

27877333 reads, 33068.0 reads per million, 235 experiments

uauaUACCCUGUAGAACCGAAUUUGUGugguauccacauagucACAGAUUCGAUUCUAGGGGAAUaua
(((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))

Structure

     A    G     C          u g   c 
uauaU CCCU UAGAA CGAAUUUGUG g uau c
||||| |||| ||||| |||||||||| | |||  
auaUA GGGG AUCUU GCUUAGACAc u aua a
     A    -     A          - g   c 

Annotation confidence High

Genome context

18: 54645765-54645832 [+]

Mature eca-miR-10b-5p

• Accession: MIMAT0013090
• Description: Equus caballus eca-miR-10b-5p mature miRNA
• Sequence: 5 - UACCCUGUAGAACCGAAUUUGUG - 27
• Evidence: not_experimental

Mature eca-miR-10b-3p

• Accession: MIMAT0051422
• Description: Equus caballus eca-miR-10b-3p mature miRNA
• Sequence: 44 - ACAGAUUCGAUUCUAGGGGAAU - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131