Stem-loop eca-mir-204b

Accession

MI0012862

Description

Equus caballus eca-mir-204b precursor miRNA

Literature search

2 open access papers mention eca-mir-204b
(10 sentences)

Sequence

220805 reads, 1463.0 reads per million, 204 experiments

uggacUUCCCUUUGUCAUCCUAUGCCUGagaauauaugaaggagGCUGGGAAGGCAAAGGGACGUuca
(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))

Structure

     U          A     U    Gagaau 
uggac UCCCUUUGUC UCCUA GCCU      a
||||| |||||||||| ||||| ||||      u
acuUG AGGGAAACGG AGGGU CGga      a
     C          A     -    ggaagu 

Annotation confidence High

Genome context

23: 19459719-19459786 [+]

Mature eca-miR-204b-5p

• Accession: MIMAT0013112
• Description: Equus caballus eca-miR-204b-5p mature miRNA
• Sequence: 6 - UUCCCUUUGUCAUCCUAUGCCUG - 28
• Evidence: not_experimental

Mature eca-miR-204b-3p

• Accession: MIMAT0051434
• Description: Equus caballus eca-miR-204b-3p mature miRNA
• Sequence: 45 - GCUGGGAAGGCAAAGGGACGU - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131