Stem-loop eca-mir-1302b-2

Accession

MI0012688

Description

Equus caballus eca-mir-1302b-2 precursor miRNA

Sequence

6 reads, 17.0 reads per million, 5 experiments

gaaugcccgguuaaauuucaauuucaaaucaacaaugaauaauuuuuuaaucuaaguaugucccaugcaauauUUGGGACAUACUUAUACUAGAacauuauuguugauaugaaauucaaauuuaauuggacguc
..(((.((((((((((((.(((((((.(((((((((((......(((((...(((((((((((((.........)))))))))))))...)))))..))))))))))).))))))).)))))))))))).))).

Structure

ga   c            c       a           auaauu     auc             ugc 
  aug ccgguuaaauuu aauuuca aucaacaauga      uuuua   uaaguauguccca   a
  ||| |||||||||||| ||||||| |||||||||||      |||||   |||||||||||||   a
  ugc gguuaauuuaaa uuaaagu uaguuguuauu      aAGAU   AUUCAUACAGGGU   u
-c   a            c       a           ----ac     CAU             Uua 

Annotation confidence Not enough data

Genome context

4: 60102270-60102403 [-]

Mature eca-miR-1302b-3p

• Accession: MIMAT0012934
• Description: Equus caballus eca-miR-1302b-3p mature miRNA
• Sequence: 74 - UUGGGACAUACUUAUACUAGA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131