Stem-loop eca-mir-493a

Accession

MI0012794

Description

Equus caballus eca-mir-493a precursor miRNA

Literature search

1 open access papers mention eca-mir-493a
(2 sentences)

Sequence

ccugggaugcaggcgaguuaggagaaaucuaacaaucgauaaauauucCUUGGGUCUACUGUGUGCCAGG
(((((.((((((..((.(((((.((((((........))).....)))))))).))..)))))).)))))

Structure

     g      gc  g     a   -----   uaa 
ccugg augcag  ga uuagg gaa     auc   c
||||| ||||||  || ||||| |||     |||    
GGACC UGUGUC  CU GGUUC cuu     uag   a
     G      AU  G     -   auaaa   cua 

Annotation confidence Not enough data

Genome context

chr12: 10298217-10298286 [-]

Mature eca-miR-493a

• Accession: MIMAT0013051
• Description: Equus caballus eca-miR-493a mature miRNA
• Sequence: 49 - CUUGGGUCUACUGUGUGCCAGG - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131