miRBase entry: eca-mir-365-2

Stem-loop eca-mir-365-2


Accession
MI0012802
Description
Equus caballus eca-mir-365-2 precursor miRNA
Gene family
MIPF0000061; mir-365


Sequence

54 reads, 8 reads per million, 1 experiments
accgcagggaaaaugagggacuuuugggggcagauguguuuccauuccacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugca
...((((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))).

Structure
acc      aa        ac           ----   -   uuu 
   gcaggg  aaugaggg  uuuugggggca    gau gug   c
   ||||||  ||||||||  |||||||||||    ||| |||   c
   cguucu  uUAUUCCU  AAAAUCCCCGU    cua cac   a
--a      cg        -A           AAUa   u   cuu 


Annotation confidence Not enough data
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Genome context
chr13: 30682630-30682716 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-365-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-365

Accession MIMAT0013038
Description Equus caballus eca-miR-365 mature miRNA
Sequence 56 - UAAUGCCCCUAAAAAUCCUUAU - 77
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131