Stem-loop eca-mir-370

Accession

MI0012887

Description

Equus caballus eca-mir-370 precursor miRNA

Literature search

3 open access papers mention eca-mir-370
(3 sentences)

Sequence

155353 reads, 1296.0 reads per million, 213 experiments

agacagagaggcCAGGUCACGUCUCUGCAGUUACAcagcucaugaguGCCUGCUGGGGUGGAACCUGGUcugucu
....(((.(((((((((..((((((.((((.(((.((.....)).))).)))).))))))..))))))))).)))

Structure

agac   g         CA      U    U   A  g 
    aga aggcCAGGU  CGUCUC GCAG UAC ca c
    ||| |||||||||  |||||| |||| ||| || u
    ucu ucUGGUCCA  GUGGGG CGUC Gug gu c
----   g         AG      U    C   a  a 

Annotation confidence High

Genome context

24: 43212455-43212529 [+]

Mature eca-miR-370-5p

• Accession: MIMAT0051444
• Description: Equus caballus eca-miR-370-5p mature miRNA
• Sequence: 13 - CAGGUCACGUCUCUGCAGUUACA - 35
• Evidence: not_experimental

Mature eca-miR-370-3p

• Accession: MIMAT0013142
• Description: Equus caballus eca-miR-370-3p mature miRNA
• Sequence: 48 - GCCUGCUGGGGUGGAACCUGGU - 69
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131