Stem-loop eca-mir-514

Accession

MI0012978

Description

Equus caballus eca-mir-514 precursor miRNA

Sequence

419 reads, 63 reads per million, 1 experiments

uucuuuuugugguacccuacuccagagaauggcaaucauguauaacuaaaugugAUUGACACCUCUGUGAGUGGAauaaugcaugacuu
.......((((.((..(((((((((((..((.(((((((((........))))))))).)).))))).))))))..)).))))......

Structure

uucuuuu    g  cc      -     aa  g         aua 
       ugug ua  cuacuc cagag  ug caaucaugu   a
       |||| ||  |||||| |||||  || |||||||||    
       acgu au  GGUGAG GUCUC  AC GUUAgugua   c
-uucagu    a  aA      U     -C  A         aau 

Annotation confidence Not enough data

Genome context

chrX: 116793914-116794002 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from eca-mir-514

Mature eca-miR-514

• Accession: MIMAT0013234
• Description: Equus caballus eca-miR-514 mature miRNA
• Sequence: 55 - AUUGACACCUCUGUGAGUGGA - 75
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131