Stem-loop eca-mir-26a

Accession

MI0012728

Description

Equus caballus eca-mir-26a precursor miRNA

Literature search

19 open access papers mention eca-mir-26a
(69 sentences)

Sequence

55930035 reads, 42085.0 reads per million, 238 experiments

ggcuguggcuggaUUCAAGUAAUCCAGGAUAGGCUguuuccaucugugaggCCUAUUCUUGAUUACUUGUUUCuggaggcagcu
((((((..(((((..(((((((((.((((((((((..............)))))))))).)))))))))..)))))..))))))

Structure

      gg     UU         C          guuucc 
ggcugu  cugga  CAAGUAAUC AGGAUAGGCU      a
||||||  |||||  ||||||||| ||||||||||       
ucgacg  gguCU  GUUCAUUAG UCUUAUCCgg      u
      ga     UU         U          aguguc 

Annotation confidence High

Genome context

6: 76295577-76295660 [-]

Mature eca-miR-26a-5p

• Accession: MIMAT0012975
• Description: Equus caballus eca-miR-26a-5p mature miRNA
• Sequence: 14 - UUCAAGUAAUCCAGGAUAGGCU - 35
• Evidence: not_experimental

Mature eca-miR-26a-1-3p

• Accession: MIMAT0051595
• Description: Equus caballus eca-miR-26a-1-3p mature miRNA
• Sequence: 52 - CCUAUUCUUGAUUACUUGUUUC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131