Stem-loop eca-mir-26a-2

Accession

MI0012826

Description

Equus caballus eca-mir-26a-2 precursor miRNA

Literature search

3 open access papers mention eca-mir-26a-2
(6 sentences)

Sequence

55973118 reads, 41871.0 reads per million, 238 experiments

guggccucgUUCAAGUAAUCCAGGAUAGGCUgugcaggucccaaugggCCUAUUCUUGGUUACUUGCACGcggacgc
(((.((.(((.(((((((((.((((((((((...............)))))))))).))))))))).))).)).)))

Structure

   g  u   U         C          gugcag 
gug cc cgU CAAGUAAUC AGGAUAGGCU      g
||| || ||| ||||||||| ||||||||||      u
cgc gg GCA GUUCAUUGG UCUUAUCCgg      c
   a  c   C         U          guaacc 

Annotation confidence High

Genome context

16: 48848856-48848932 [-]

Mature eca-miR-26a-5p

• Accession: MIMAT0012975
• Description: Equus caballus eca-miR-26a-5p mature miRNA
• Sequence: 10 - UUCAAGUAAUCCAGGAUAGGCU - 31
• Evidence: not_experimental

Mature eca-miR-26a-2-3p

• Accession: MIMAT0051412
• Description: Equus caballus eca-miR-26a-2-3p mature miRNA
• Sequence: 49 - CCUAUUCUUGGUUACUUGCACG - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131