Stem-loop eca-mir-190a

Accession

MI0012652

Description

Equus caballus eca-mir-190a precursor miRNA

Literature search

1 open access papers mention eca-mir-190a
(1 sentences)

Sequence

23295 reads, 246.0 reads per million, 161 experiments

cugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaACUAUAUAUCAAACAUAUUCCUacag
(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..)))))

Structure

     -U                UA     uuau 
cugug  GAUAUGUUUGAUAUAU  GGUug    u
|||||  ||||||||||||||||  |||||     
gacaU  UUAUACAAACUAUAUA  UCAac    u
     CC                --     cuaa 

Annotation confidence High

Genome context

1: 130513695-130513761 [-]

Mature eca-miR-190a-5p

• Accession: MIMAT0012896
• Description: Equus caballus eca-miR-190a-5p mature miRNA
• Sequence: 6 - UGAUAUGUUUGAUAUAUUAGGU - 27
• Evidence: not_experimental

Mature eca-miR-190a-3p

• Accession: MIMAT0051315
• Description: Equus caballus eca-miR-190a-3p mature miRNA
• Sequence: 42 - ACUAUAUAUCAAACAUAUUCCU - 63
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131