Stem-loop eca-mir-126

Accession

MI0012919

Description

Equus caballus eca-mir-126 precursor miRNA

Literature search

1 open access papers mention eca-mir-126
(4 sentences)

Sequence

15285 reads, 2314 reads per million, 1 experiments

cgacgggaCAUUAUUACUUUUGGUACGCGcugugacacuucaaacUCGUACCGUGAGUAAUAAUGCGccgucg
((((((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..))))))

Structure

      ga           U       CGcug   c 
cgacgg  CAUUAUUACUU UGGUACG     uga a
||||||  ||||||||||| |||||||     |||  
gcugcc  GUAAUAAUGAG GCCAUGC     acu c
      GC           U       -Ucaa   u 

Annotation confidence High

Genome context

chr25: 37315402-37315474 [-]

Mature eca-miR-126-5p

• Accession: MIMAT0013176
• Description: Equus caballus eca-miR-126-5p mature miRNA
• Sequence: 9 - CAUUAUUACUUUUGGUACGCG - 29
• Evidence: not_experimental

Mature eca-miR-126-3p

• Accession: MIMAT0013177
• Description: Equus caballus eca-miR-126-3p mature miRNA
• Sequence: 46 - UCGUACCGUGAGUAAUAAUGCG - 67
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131