Stem-loop eca-mir-92a

Accession

MI0012836

Description

Equus caballus eca-mir-92a precursor miRNA

Literature search

20 open access papers mention eca-mir-92a
(55 sentences)

Sequence

8600255 reads, 16842.0 reads per million, 239 experiments

acAGGUUGGGAUCGGUUGCAAUGCUguguuucuguauggUAUUGCACUUGUCCCGGCCUGU
((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))

Structure

            C   U           uu 
acAGGUUGGGAU GGU GCAAUGCUgug  u
|||||||||||| ||| |||||||||||   
UGUCCGGCCCUG UCA CGUUAUgguau  c
            U   -           gu 

Annotation confidence High

Genome context

17: 61685746-61685806 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from eca-mir-92a

Mature eca-miR-92a-5p

• Accession: MIMAT0051420
• Description: Equus caballus eca-miR-92a-5p mature miRNA
• Sequence: 3 - AGGUUGGGAUCGGUUGCAAUGCU - 25
• Evidence: not_experimental

Mature eca-miR-92a-3p

• Accession: MIMAT0013089
• Description: Equus caballus eca-miR-92a-3p mature miRNA
• Sequence: 40 - UAUUGCACUUGUCCCGGCCUGU - 61
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131