Stem-loop eca-mir-423

Accession

MI0012784

Description

Equus caballus eca-mir-423 precursor miRNA

Literature search

2 open access papers mention eca-mir-423
(4 sentences)

Sequence

5044 reads, 764 reads per million, 1 experiments

aggcUGAGGGGCAGAGAGCGAGACUUUucuauuuuccaaaAGCUCGGUCUGAGGCCCCUCAGU
..((((((((((..(((.((((.(((((.........))))))))).)))...))))))))))

Structure

ag          -AG   G    A     cua 
  gcUGAGGGGC   AGA CGAG CUUUu   u
  ||||||||||   ||| |||| |||||   u
  UGACUCCCCG   UCU GCUC GAaaa   u
--          GAG   G    -     ccu 

Annotation confidence High

Genome context

chr11: 43782441-43782503 [+]

Mature eca-miR-423-5p

• Accession: MIMAT0013039
• Description: Equus caballus eca-miR-423-5p mature miRNA
• Sequence: 5 - UGAGGGGCAGAGAGCGAGACUUU - 27
• Evidence: not_experimental

Mature eca-miR-423-3p

• Accession: MIMAT0013040
• Description: Equus caballus eca-miR-423-3p mature miRNA
• Sequence: 41 - AGCUCGGUCUGAGGCCCCUCAGU - 63
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131