Stem-loop eca-mir-24-2

Accession

MI0012864

Description

Equus caballus eca-mir-24-2 precursor miRNA

Literature search

4 open access papers mention eca-mir-24-2
(11 sentences)

Sequence

3365835 reads, 4496.0 reads per million, 239 experiments

cuccgGUGCCUACUGAGCUGAUAUCAGuucucauuuuacacacUGGCUCAGUUCAGCAGGAACAGgag
((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).))))

Structure

    g  G   A         UA     ucuca 
cucc GU CCU CUGAGCUGA  UCAGu     u
|||| || ||| |||||||||  |||||     u
gagG CA GGA GACUUGACU  GGUca     u
    A  A   C         -C     cacau 

Annotation confidence High

Genome context

23: 2131864-2131931 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from eca-mir-24-2

Mature eca-miR-24-2-5p

• Accession: MIMAT0051363
• Description: Equus caballus eca-miR-24-2-5p mature miRNA
• Sequence: 6 - GUGCCUACUGAGCUGAUAUCAG - 27
• Evidence: not_experimental

Mature eca-miR-24-3p

• Accession: MIMAT0012987
• Description: Equus caballus eca-miR-24-3p mature miRNA
• Sequence: 44 - UGGCUCAGUUCAGCAGGAACAG - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131