Stem-loop eca-mir-451

Accession

MI0012785

Description

Equus caballus eca-mir-451 precursor miRNA

Literature search

1 open access papers mention eca-mir-451
(1 sentences)

Sequence

2711 reads, 410 reads per million, 1 experiments

cuugggaaugucgaggAAACCGUUACCAUUACUGUGUUuaguaaugguaacgguucucuugcuguacccaga
.(((((.(((.(((((.(((((((((((((((((....))))))))))))))))).))))).))).))))).

Structure

c     a   u     A                 U 
 uuggg aug cgagg AACCGUUACCAUUACUG G
 ||||| ||| ||||| |||||||||||||||||  
 gaccc ugu guucu uuggcaaugguaaugau U
a     a   c     c                 U 

Annotation confidence Not enough data

Genome context

chr11: 42750408-42750479 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-451

Mature eca-miR-451

• Accession: MIMAT0013041
• Description: Equus caballus eca-miR-451 mature miRNA
• Sequence: 17 - AAACCGUUACCAUUACUGUGUU - 38
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131