miRBase entry: 20122185

Prediction of novel miRNAs and associated target genes in Glycine max

PubMed ID 20122185
Authors Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
Journal BMC Bioinformatics
Volume 11
Pages S14

There are 138 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
gma-MIR168a MI0001779 None chr9 44068673 44068797 - High
gma-MIR390b MI0007215 None chr14 46392430 46392532 + High
gma-MIR171b MI0007217 None chr4 50115835 50115926 + High
gma-MIR482a MI0007218 None chr2 7873063 7873157 + High
gma-MIR1509a MI0007221 None chr17 9813056 9813166 + High
gma-MIR1510a MI0007222 None chr16 31887382 31887474 + High
gma-MIR1511 MI0007223 None chr18 20910835 20910933 + High
gma-MIR167e MI0010725 None chr20 39002092 39002200 + High
gma-MIR1509b MI0010730 None chr5 1350441 1350549 + High
gma-MIR4340 MI0016469 None chr19 2095404 2095468 - Medium
gma-MIR4341 MI0016470 None chr6 12004246 12004361 - Low
gma-MIR4342 MI0016471 None chr18 14013079 14013145 + Medium
gma-MIR4343a MI0016472 None chr15 18637694 18637790 - Low
gma-MIR4344 MI0016473 None chr18 19606858 19606976 - Low
gma-MIR4345 MI0016474 None chr14 48700139 48700232 - Low
gma-MIR4364b MI0016475 None chr18 46677081 46677183 + Low
gma-MIR4346 MI0016476 None None None High
gma-MIR4347 MI0016477 None chr15 12783164 12783304 + Low
gma-MIR4348a MI0016478 None chr12 37311016 37311160 - Low
gma-MIR4349 MI0016479 None chr19 44546410 44546567 + High
gma-MIR4350 MI0016480 None None None Medium
gma-MIR4351 MI0016481 None None None Low
gma-MIR4352a MI0016482 None chr10 24453395 24453530 + Low
gma-MIR4353 MI0016483 None chr6 51362622 51362680 - Low
gma-MIR1520e MI0016484 None chr17 17845222 17845385 - Low
gma-MIR1520f MI0016485 None chr2 17814168 17814270 - Low
gma-MIR1520g MI0016486 None chr12 32708631 32708738 - Low
gma-MIR4354 MI0016487 None chr9 42023868 42024017 + Low
gma-MIR4355 MI0016488 None chr18 1371151 1371310 - Low
gma-MIR4356 MI0016489 None chr3 34210830 34210909 + Low
gma-MIR4357 MI0016490 None chr16 25716585 25716759 - Low
gma-MIR4358 MI0016491 None chr6 3663700 3663865 - Low
gma-MIR4359a MI0016492 None chr1 42312667 42312778 - Low
gma-MIR4360 MI0016493 None chr4 6566470 6566549 - Low
gma-MIR4359b MI0016494 None chr7 16796162 16796228 + Low
gma-MIR4387c MI0016495 None chr7 16521619 16521750 + Low
gma-MIR1520h MI0016496 None chr6 15546820 15546906 + Low
gma-MIR4361 MI0016497 None chr16 15914012 15914074 + Low
gma-MIR1520i MI0016498 None chr3 34949369 34949512 - Low
gma-MIR4362 MI0016499 None chr13 36082340 36082537 + Medium
gma-MIR4363 MI0016500 None chr17 19200043 19200157 + Low
gma-MIR4364a MI0016501 None chr13 2006154 2006264 + Low
gma-MIR4380a MI0016502 None chr1 39453514 39453666 - Low
gma-MIR396d MI0016503 None chr17 8782240 8782347 - High
gma-MIR1520j MI0016504 None chr11 5133814 5133989 - Low
gma-MIR4365 MI0016505 None chr10 11249866 11249961 - Low
gma-MIR4366 MI0016506 None chr5 29557157 29557418 - Low
gma-MIR4367 MI0016507 None chr1 2417160 2417384 + Low
gma-MIR4368a MI0016508 None chr18 55058212 55058299 - Low
gma-MIR4371c MI0016509 None chr5 2489793 2489939 - Medium
gma-MIR4368b MI0016510 None chr2 39873834 39873978 + Low
gma-MIR4369 MI0016511 None chr7 13628703 13628781 - Low
gma-MIR4370 MI0016512 None chr11 28937222 28937287 + Low
gma-MIR4387b MI0016513 None chr7 4991373 4991484 + Low
gma-MIR4371a MI0016514 None chr17 4626871 4626998 + Low
gma-MIR4371b MI0016515 None chr7 24370816 24370998 - Low
gma-MIR4372a MI0016516 None chr10 49480492 49480612 - Low
gma-MIR4352b MI0016517 None chr14 13919818 13919987 + Low
gma-MIR4373 MI0016518 None chr17 6360081 6360184 - Low
gma-MIR4374a MI0016519 None chr1 42014046 42014212 - Medium
gma-MIR4375 MI0016520 None chr9 38836079 38836146 - -
gma-MIR391 MI0016521 None chr13 42292832 42292941 + High
gma-MIR4377 MI0016522 None chr4 17757695 17757862 + Low
gma-MIR4374b MI0016523 None chr18 44789134 44789239 + Low
gma-MIR4378a MI0016524 None chr10 44388201 44388363 - Low
gma-MIR4378b MI0016525 None chr9 31722886 31722976 - Low
gma-MIR4379 MI0016526 None chr7 1503356 1503439 - Medium
gma-MIR482b MI0016527 None chr20 36454144 36454212 + High
gma-MIR4380b MI0016528 None chr19 4425779 4425854 + Low
gma-MIR4381 MI0016529 None chr15 47293543 47293680 - Low
gma-MIR4382 MI0016530 None chr6 18881198 18881368 + Low
gma-MIR4383 MI0016531 None chr2 26866450 26866576 + Low
gma-MIR1520k MI0016532 None chr19 5256979 5257106 + Low
gma-MIR1520l MI0016533 None chr18 51411526 51411635 + Low
gma-MIR1520m MI0016534 None chr4 9565785 9565912 - Low
gma-MIR4384 MI0016535 None chr12 9054935 9055000 + High
gma-MIR1520n MI0016536 None chr14 47470517 47470612 + Low
gma-MIR1520o MI0016537 None chr17 13437941 13438133 + Low
gma-MIR4385 MI0016538 None chr20 25118846 25118941 - Low
gma-MIR4386 MI0016539 None chr7 1369485 1369539 + Low
gma-MIR4387a MI0016540 None KQ474119.1 490978 491089 + Low
gma-MIR4388 MI0016541 None chr10 46504519 46504678 - Low
gma-MIR4387d MI0016542 None chr18 43759747 43759852 - Low
gma-MIR4389 MI0016543 None chr13 32881750 32881896 - Low
gma-MIR4390 MI0016544 None chr17 15303731 15303796 + Low
gma-MIR4391 MI0016545 None chr1 22864160 22864278 + Low
gma-MIR4392 MI0016546 None chr9 49977292 49977401 + -
gma-MIR4343b MI0016547 None chr19 35003600 35003666 - Low
gma-MIR167g MI0016548 None chr10 39602156 39602233 + High
gma-MIR4393a MI0016549 None chr10 1366374 1366509 - Low
gma-MIR4394 MI0016550 None chr10 20498009 20498098 - Low
gma-MIR4395 MI0016551 None chr2 33485031 33485139 + Low
gma-MIR4396 MI0016552 None chr18 3429421 3429478 - -
gma-MIR4397 MI0016553 None chr4 38550859 38551015 - High
gma-MIR1520r MI0016554 None chr19 49004957 49005071 - Low
gma-MIR4398 MI0016555 None chr1 44037488 44037552 + Low
gma-MIR4399 MI0016556 None chr3 23233443 23233593 + Low
gma-MIR4400 MI0016557 None chr20 1756046 1756202 + Low
gma-MIR4393b MI0016558 None chr1 49068990 49069101 - Low
gma-MIR156f MI0016559 None chr2 47699715 47699820 - High
gma-MIR4401a MI0016560 None chr14 28771219 28771334 + Low
gma-MIR4402 MI0016561 None chr20 44128634 44128808 - Low
gma-MIR4403 MI0016562 None chr4 665909 666012 + Low
gma-MIR1520p MI0016563 None chr11 4663268 4663406 + Low
gma-MIR4404 MI0016564 None chr13 20028554 20028615 - -
gma-MIR4405 MI0016565 None chr6 9334440 9334565 + Medium
gma-MIR4406 MI0016566 None chr1 40696309 40696432 + Low
gma-MIR4407 MI0016567 None chr20 47144592 47144722 + High
gma-MIR4408 MI0016568 None chr8 28086876 28087016 + Low
gma-MIR4409 MI0016569 None chr16 5771195 5771255 - Low
gma-MIR4410 MI0016570 None chr5 810922 810992 - Low
gma-MIR169d MI0016571 None chr15 14186946 14187033 + High
gma-MIR4411 MI0016572 None chr1 12590615 12590670 + Medium
gma-MIR1520q MI0016573 None chr8 13091468 13091583 - Low
gma-MIR172f MI0016574 None chr11 26905395 26905527 + High
gma-MIR171c MI0016575 None chr7 43625963 43626066 - High
gma-MIR169e MI0016576 None chr15 14210033 14210152 + High
gma-MIR394b MI0016577 None chr14 48784355 48784458 + High
gma-MIR4412 MI0016578 None chr4 37037465 37037552 - High
gma-MIR4413a MI0016579 None chr19 1832822 1832908 + High
gma-MIR156g MI0016580 None chr19 8868796 8868913 - High
gma-MIR159d MI0016581 None None None High
gma-MIR394a MI0016582 None chr17 41517111 41517267 + High
gma-MIR4414a MI0016583 None chr20 36756848 36756975 + High
gma-MIR4415a MI0016584 None chr18 56193529 56193704 + High
gma-MIR4416a MI0016585 None chr19 40891340 40891469 - High
gma-MIR396e MI0016586 None chr17 35037484 35037597 - High
gma-MIR172a MI0001780 None chr12 6139598 6139756 - High
gma-MIR172b MI0001781 None chr13 41847312 41847464 - High
gma-MIR172c MI0010727 None chr18 2979182 2979334 + High
gma-MIR172d MI0010728 None chr14 5659819 5659968 + High
gma-MIR172e MI0010729 None chr11 31482550 31482702 - High
gma-MIR172g MI0018668 None chr10 31996846 31996959 - High
gma-MIR172h MI0018669 None chr10 44054389 44054479 + High
gma-MIR172i MI0018670 None chr15 2892841 2893001 - High
gma-MIR172j MI0018671 None chr20 42009499 42009588 - High
gma-MIR172k MI0019746 None chr12 33517484 33517617 + High
gma-MIR172l MI0019750 None chr13 43075243 43075420 + High



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