Stem-loop gma-MIR4387b

Accession

MI0016513

Description

Glycine max gma-MIR4387b precursor miRNA

Literature search

1 open access papers mention gma-MIR4387b
(1 sentences)

Sequence

2264 reads, 13.0 reads per million, 167 experiments

gugacaggcagagugucaugucaucaugucuugccacAUCAUUCAAGGUGUUGGUGUGGCAaugaaaugauguucaugauAAGGUGUGAUGGCAUGACACUCUGucugucac
(((((((((((((((((((((((((((((((((((((((((..........))))))))))(((((......)))))....)))))))))))))))))))))))))))))))

Structure

                               --------------------          UUCA 
gugacaggcagagugucaugucaucaugucu                    ugccacAUCA    A
|||||||||||||||||||||||||||||||                    ||||||||||     
cacugucuGUCUCACAGUACGGUAGUGUGGA                    ACGGUGUGGU    G
                               Auaguacuuguaguaaagua          UGUG 

Annotation confidence Low

Genome context

chr7: 4991373-4991484 [+]

Mature gma-miR4387b-5p

• Accession: MIMAT0054104
• Description: Glycine max gma-miR4387b-5p mature miRNA
• Sequence: 38 - AUCAUUCAAGGUGUUGGUGUGGCA - 61
• Evidence: experimental ; unknown

Mature gma-miR4387b-3p

• Accession: MIMAT0018272
• Description: Glycine max gma-miR4387b-3p mature miRNA
• Sequence: 81 - AAGGUGUGAUGGCAUGACACUCUG - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14