Stem-loop gma-MIR4368b

Accession

MI0016510

Description

Glycine max gma-MIR4368b precursor miRNA

Literature search

1 open access papers mention gma-MIR4368b
(1 sentences)

Sequence

6620 reads, 18.0 reads per million, 167 experiments

cAAGGACGGUACUUACGUAAGCAACgucuuugaaaguucacaaacaaagacggugcaagcaacguccacaaacaaagacggugcaagcaacgucguauUUGUUUGUGAACUUUCAAAGACGcugcuuauguaagcaccgucuuuu
.(((((((((.((((((((((((.((((((((((((((((((((((((((((.(((..(((.((((..........)))).)))..))).))))...)))))))))))))))))))))))).)))))))))))).))))))))).

Structure

c         A            A                        ---    g   aa   a    caca 
 AAGGACGGU CUUACGUAAGCA Cgucuuugaaaguucacaaacaaa   gacg ugc  gca cguc    a
 ||||||||| |||||||||||| ||||||||||||||||||||||||   |||| |||  ||| ||||     
 uuucugcca gaauguauucgu GCAGAAACUUUCAAGUGUUUGUUu   cugc acg  cgu gcag    a
u         c            c                        aug    a   aa   g    aaac 

Annotation confidence Low

Genome context

chr2: 39873834-39873978 [+]

Mature gma-miR4368b-5p

• Accession: MIMAT0018269
• Description: Glycine max gma-miR4368b-5p mature miRNA
• Sequence: 2 - AAGGACGGUACUUACGUAAGCAAC - 25
• Evidence: experimental ; Illumina [1]

Mature gma-miR4368b-3p

• Accession: MIMAT0054101
• Description: Glycine max gma-miR4368b-3p mature miRNA
• Sequence: 99 - UUGUUUGUGAACUUUCAAAGACG - 121
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14