Dead hairpin entry

Stem-loop gma-MIR1520m

Accession

MI0016534

Description

Glycine max gma-MIR1520m precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1520m
(2 sentences)

Sequence

59871 reads, 143.0 reads per million, 178 experiments

UUCUUAUUGGAUGAUGACUGUuacgugccauguucugauuggaugucaacuccauaaaagaugaaaugaauuguuguuuucauuuaucAAUCAGAACAUGACAUGUGACAAUuaucauucaauaagaa
.((((((((((((((((.(((((((((.(((((((((((((((.......)))......((((((.((((........)))))))))))))))))))))).))))))))).)))))))))))))))).

Structure

U                C         c            ggaugucaacuccauaaaa      a    uug 
 UCUUAUUGGAUGAUGA UGUuacgug cauguucugauu                   gaugaa ugaa   u
 |||||||||||||||| ||||||||| ||||||||||||                   |||||| ||||    
 agaauaacuuacuauU ACAGUGUAC GUACAAGACUAA                   cuauuu acuu   u
a                A         A            -------------------      -    uug