Stem-loop gma-MIR4344

Accession

MI0016473

Description

Glycine max gma-MIR4344 precursor miRNA

Sequence

11747 reads, 33.0 reads per million, 172 experiments

uuaagacagugcuuaccucaacaacgucuuugaAAGUAGACAUUCUAAGACGUUGCUgauauaagcaccgucuuaaaaugcguacuUUCAAAGACGUUGCUGAUGUAAgcaccguuuuu
..(((((.((((((((.(((.(((((((((((((((((..((((.(((((((.((((......)))).))))))).))))..))))))))))))))))).))).)))))))).))))).

Structure

uu     a        c   a                 GA    C       U    ga 
  aagac gugcuuac uca caacgucuuugaAAGUA  CAUU UAAGACG UGCU  u
  ||||| |||||||| ||| |||||||||||||||||  |||| ||||||| ||||   
  uuuug cacgAAUG AGU GUUGCAGAAACUUucau  guaa auucugc acga  a
-u     c        U   C                 gc    a       c    au 

Annotation confidence Low

Genome context

chr18: 19606858-19606976 [-]

Mature gma-miR4344-5p

• Accession: MIMAT0018232
• Description: Glycine max gma-miR4344-5p mature miRNA
• Sequence: 34 - AAGUAGACAUUCUAAGACGUUGCU - 57
• Evidence: experimental ; Illumina [1]

Mature gma-miR4344-3p

• Accession: MIMAT0054067
• Description: Glycine max gma-miR4344-3p mature miRNA
• Sequence: 87 - UUCAAAGACGUUGCUGAUGUAA - 108
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14