Stem-loop gma-MIR4391

Accession

MI0016545

Description

Glycine max gma-MIR4391 precursor miRNA

Sequence

5862 reads, 124.0 reads per million, 178 experiments

ggaccaagcUGUUCUUCUUAGUUCUUUGCCGAGagcuuaugaaaauuuuguagacaucacaacaucaauauuuuucauaagcUCUCGGCAAAGAACUAAGAAGAAGaacaauuugguuc
((((((((.((((((((((((((((((((((((((((((((((((..(((...............)))...)))))))))))))))))))))))))))...))))))))).))))))))

Structure

        c         ---                           -uu   uagaca 
ggaccaag UGUUCUUCU   UAGUUCUUUGCCGAGagcuuaugaaaa   uug      u
|||||||| |||||||||   |||||||||||||||||||||||||||   |||      c
cuugguuu acaaGAAGA   AUCAAGAAACGGCUCUcgaauacuuuu   aac      a
        a         AGA                           uau   uacaac 

Annotation confidence Low

Genome context

chr1: 22864160-22864278 [+]

Mature gma-miR4391-5p

• Accession: MIMAT0054133
• Description: Glycine max gma-miR4391-5p mature miRNA
• Sequence: 10 - UGUUCUUCUUAGUUCUUUGCCGAG - 33
• Evidence: experimental ; unknown

Mature gma-miR4391-3p

• Accession: MIMAT0018304
• Description: Glycine max gma-miR4391-3p mature miRNA
• Sequence: 83 - UCUCGGCAAAGAACUAAGAAGAAG - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14