Stem-loop gma-MIR4350

Accession

MI0016480

Description

Glycine max gma-MIR4350 precursor miRNA

Sequence

9072 reads, 66.0 reads per million, 178 experiments

ucaaaauUCAAAUGAUUUUGUGUCGUUGGuucaucaauucaaaauuuucaauaugccauuuucacaaacucugguaaucgauuaccaaagaauuugugaaaaugacauauugaaaauuuugaaCUGAUGAACUAACGGCACAACAUUauuugaauuuuga
((((((((((((((((.(((((((((((((((((((.((((((((((((((((((.((((((((((((.((((((((....)))))..))).)))))))))))).)))))))))))))))))).))))))))))))))))))).))))))))))))))))

Structure

                U                   a                  c            c   --     u 
ucaaaauUCAAAUGAU UUGUGUCGUUGGuucauca uucaaaauuuucaauaug cauuuucacaaa ucu  gguaa c
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| |||  |||||  
aguuuuaaguuuaUUA AACACGGCAAUCAAGUAGU aaguuuuaaaaguuauac guaaaaguguuu aga  ccauu g
                C                   C                  a            a   aa     a 

Annotation confidence Medium

Genome context

Unknown

Mature gma-miR4350-5p

• Accession: MIMAT0018239
• Description: Glycine max gma-miR4350-5p mature miRNA
• Sequence: 8 - UCAAAUGAUUUUGUGUCGUUGG - 29
• Evidence: experimental ; Illumina [1]

Mature gma-miR4350-3p

• Accession: MIMAT0054072
• Description: Glycine max gma-miR4350-3p mature miRNA
• Sequence: 124 - CUGAUGAACUAACGGCACAACAUU - 147
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14