Stem-loop gma-MIR4356

Accession

MI0016489

Description

Glycine max gma-MIR4356 precursor miRNA

Sequence

1824 reads, 7.0 reads per million, 162 experiments

caccgucuuagaaaaccucAACUUUCAAAGACAGUGCUGACGUCAGGACUGUCUUAGAAAGCCAGGCuucaaagauggug
(((((((((.(((..(((...(((((.((((((((.(((....))).)))))))).)))))..))).))).)))))))))

Structure

         a   aa   cAA     A        G   A 
caccgucuu gaa  ccu   CUUUC AAGACAGU CUG C
||||||||| |||  |||   ||||| |||||||| |||  
gugguagaa cuu  GGA   GAAAG UUCUGUCA GAC G
         a   -C   -CC     A        G   U 

Annotation confidence Low

Genome context

chr3: 34210830-34210909 [+]

Mature gma-miR4356-5p

• Accession: MIMAT0054080
• Description: Glycine max gma-miR4356-5p mature miRNA
• Sequence: 20 - AACUUUCAAAGACAGUGCUGACGU - 43
• Evidence: experimental ; unknown

Mature gma-miR4356-3p

• Accession: MIMAT0018248
• Description: Glycine max gma-miR4356-3p mature miRNA
• Sequence: 44 - CAGGACUGUCUUAGAAAGCCAGGC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14