Stem-loop gma-MIR4374b

Accession

MI0016523

Description

Glycine max gma-MIR4374b precursor miRNA

Literature search

2 open access papers mention gma-MIR4374b
(2 sentences)

Sequence

12467 reads, 35.0 reads per million, 174 experiments

gguGCUUACCUCAGCAACGUCUUUaaaaguaggcauucuaagacguugcugaaguaagcaccgucuuugaaugccUACUUUCAAAGACGUUGUUGAGguaagcacc
((((((((((((((((((((((((.(((((((((((((.((((((.((((......)))).)))))).))))))))))))).))))))))))))))))))))))))

Structure

                        a             u      u    ga 
gguGCUUACCUCAGCAACGUCUUU aaaguaggcauuc aagacg ugcu  a
|||||||||||||||||||||||| ||||||||||||| |||||| ||||   
ccacgaaugGAGUUGUUGCAGAAA UUUCAUccguaag uucugc acga  g
                        C             u      c    au 

Annotation confidence Low

Genome context

chr18: 44789134-44789239 [+]

Mature gma-miR4374b-5p

• Accession: MIMAT0054112
• Description: Glycine max gma-miR4374b-5p mature miRNA
• Sequence: 4 - GCUUACCUCAGCAACGUCUUU - 24
• Evidence: experimental ; unknown

Mature gma-miR4374b-3p

• Accession: MIMAT0018282
• Description: Glycine max gma-miR4374b-3p mature miRNA
• Sequence: 76 - UACUUUCAAAGACGUUGUUGAG - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14