Stem-loop gma-MIR4363

Accession

MI0016500

Description

Glycine max gma-MIR4363 precursor miRNA

Sequence

30324 reads, 82.0 reads per million, 178 experiments

gccuaggauaggcucugguaaucgauuaccauccaguguaAUCGAUUACACAUGAACAGGCAGCcuguaaucgauuacaacauccuguaauCGAUUACCAGAAGGCUUAUUAGgc
(((((..((((((((((((((((((((((.......((((((((((((((..((......))...)))))))))))))).......))))))))))))))))..)))))))))))

Structure

     gg      --                cauccag              -CA  AA 
gccua  auaggc  ucugguaaucgauuac       uguaAUCGAUUACA   UG  C
|||||  ||||||  ||||||||||||||||       ||||||||||||||   ||   
cgGAU  UAUUCG  AGACCAUUAGCuaaug       acauuagcuaaugu   AC  A
     --      GA                uccuaca              cCG  GG 

Annotation confidence Low

Genome context

chr17: 19200043-19200157 [+]

Mature gma-miR4363-5p

• Accession: MIMAT0054091
• Description: Glycine max gma-miR4363-5p mature miRNA
• Sequence: 41 - AUCGAUUACACAUGAACAGGCAGC - 64
• Evidence: experimental ; unknown

Mature gma-miR4363-3p

• Accession: MIMAT0018259
• Description: Glycine max gma-miR4363-3p mature miRNA
• Sequence: 92 - CGAUUACCAGAAGGCUUAUUAG - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14