Dead hairpin entry

Stem-loop gma-MIR1520j

Accession

MI0016504

Description

Glycine max gma-MIR1520j precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

4 open access papers mention gma-MIR1520j
(6 sentences)

Sequence

21713 reads, 76.0 reads per million, 178 experiments

gaauguugacugucacaugucacguucuuaUUGAAUGAUGAUUGUCACguaccauguuaugauuggauaucaacuccaugaaagaugaaaugcauuauuauuuucacuaaccaaucauaacauaacacgugaucgucaucauccaauAAGAACGUGACACAUGACAAUCAAcauuc
(((((((((.(((((..((((((((((((((((.((((((((.(((((((...(((((((((((((...(((......))).((.(((((...........)))))))..)))))))))))))...))))))).)))))))).))))))))))))))))..))))).)))))))))

Structure

         c     ca                A        U       acc             auaucaacuccaugaa  a     ugca 
gaauguuga uguca  ugucacguucuuaUUG AUGAUGAU GUCACgu   auguuaugauugg                ag ugaaa    u
||||||||| |||||  |||||||||||||||| |||||||| |||||||   |||||||||||||                || |||||    u
cuuacAACU ACAGU  ACAGUGCAAGAAuaac uacuacug uagugca   uacaauacuaacc                uc acuuu    a
         A     AC                c        c       caa             --------------aa  -     uauu