Stem-loop gma-MIR4346

Accession

MI0016476

Description

Glycine max gma-MIR4346 precursor miRNA

Sequence

29548 reads, 139.0 reads per million, 146 experiments

ugggaauggaGAAAGACCAAACGAGAAGCUGCAUaacagcguauugauuuacauaaguaaugcugaaucaaggcgcuguuacgcAGCUUCUCGUUUGUUCUUUCUCcauucccauggu
((((((((((((((((.(((((((((((((((.(((((((((.(((((((((((.....))).)))))))).))))))))).))))))))))))))).))))))))))))))))....

Structure

----                C               A         a        -   a 
    ugggaauggaGAAAGA CAAACGAGAAGCUGC Uaacagcgu uugauuua cau a
    |||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||| g
    acccuuacCUCUUUCU GUUUGCUCUUCGAcg auugucgcg aacuaagu gua u
uggu                U               c         g        c   a 

Annotation confidence High

Genome context

Unknown

Mature gma-miR4346-5p

• Accession: MIMAT0018235
• Description: Glycine max gma-miR4346-5p mature miRNA
• Sequence: 11 - GAAAGACCAAACGAGAAGCUGCAU - 34
• Evidence: experimental ; Illumina [1]

Mature gma-miR4346-3p

• Accession: MIMAT0054070
• Description: Glycine max gma-miR4346-3p mature miRNA
• Sequence: 85 - AGCUUCUCGUUUGUUCUUUCUC - 106
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14