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miRBase entry: gma-MIR4404
How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Dead hairpin entry
Stem-loop
gma-MIR4404
Accession
MI0016564
Description
Glycine max
gma-MIR4404 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.
Sequence
1984
reads,
6.0
reads per million, 162 experiments
Show Histogram
Copy Sequence
aAUUCGUGGAAGACUGGCGGAUCAAcuuaauccgcacuugauucgcgagucuuucacggauc
.((((((((((((((.(((((((((............))))))))).)))))))))))))).
Structure
a G cuuaa AUUCGUGGAAGACU GCGGAUCAA u |||||||||||||| ||||||||| uaggcacuuucuga cgcuuaguu c c g cacgc