Stem-loop gma-MIR4395

Accession

MI0016551

Description

Glycine max gma-MIR4395 precursor miRNA

Sequence

9255 reads, 32.0 reads per million, 155 experiments

gaugaggcucUGGAUAGGAGUAUGGGCUUGAGuaagcugcugccucaguccaaacuuugggcuuaggCAGCAGCUUUCUCGGACCCAUACUccuauccagaaccucauc
(((((((.((((((((((((((((((.(((((.((((((((((((.(((((((...))))))).)))))))))))).))))).)))))))))))))))))).)))))))

Structure

       c                  C     u            c       a 
gaugagg ucUGGAUAGGAGUAUGGG UUGAG aagcugcugccu aguccaa  
||||||| |||||||||||||||||| ||||| |||||||||||| ||||||| c
cuacucc agaccuauccUCAUACCC GGCUC UUCGACGACgga ucggguu  
       a                  A     U            u       u 

Annotation confidence Low

Genome context

chr2: 33485031-33485139 [+]

Mature gma-miR4395-5p

• Accession: MIMAT0018310
• Description: Glycine max gma-miR4395-5p mature miRNA
• Sequence: 11 - UGGAUAGGAGUAUGGGCUUGAG - 32
• Evidence: experimental ; Illumina [1-2]

Mature gma-miR4395-3p

• Accession: MIMAT0054138
• Description: Glycine max gma-miR4395-3p mature miRNA
• Sequence: 68 - CAGCAGCUUUCUCGGACCCAUACU - 91
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153