Stem-loop gma-MIR4385

Accession

MI0016538

Description

Glycine max gma-MIR4385 precursor miRNA

Sequence

2509 reads, 33.0 reads per million, 165 experiments

uuguaaauauAAUCGAUGUAGAAAAGUGAUUGGUgacauugauuauaaccagaaucaauguagaaaauuauuuuucuaCAUCAAUUUUAAUUAUAA
.(((((.((.(((.(((((((((((((((((....(((((((((........)))))))))....))))))))))))))))).))).)).))))).

Structure

u     a  u   C                 GGUg         aua 
 uguaa ua AAU GAUGUAGAAAAGUGAUU    acauugauu   a
 ||||| || ||| |||||||||||||||||    |||||||||    
 AUAUU AU UUA CUACaucuuuuuauuaa    uguaacuaa   c
A     A  U   A                 aaga         gac 

Annotation confidence Low

Genome context

chr20: 25118846-25118941 [-]

Mature gma-miR4385-5p

• Accession: MIMAT0018297
• Description: Glycine max gma-miR4385-5p mature miRNA
• Sequence: 11 - AAUCGAUGUAGAAAAGUGAUUGGU - 34
• Evidence: experimental ; Illumina [1]

Mature gma-miR4385-3p

• Accession: MIMAT0054126
• Description: Glycine max gma-miR4385-3p mature miRNA
• Sequence: 79 - CAUCAAUUUUAAUUAUAA - 96
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14