Stem-loop gma-MIR4365

Accession

MI0016505

Description

Glycine max gma-MIR4365 precursor miRNA

Literature search

1 open access papers mention gma-MIR4365
(1 sentences)

Sequence

2432 reads, 14.0 reads per million, 177 experiments

AAGAACUUCUUCCGCGAGAUCGCAuggaagaagguucuuccacaguuguaacauuAACUGCGGAAGAACCUUCUuccaugccaucucguggaagaa
.......(((((((((((((.((((((((((((((((((((.((((((......)))))).)))))))))))))))))))).))))))))))))).

Structure

AAGAACU             C                    a      ua 
       UCUUCCGCGAGAU GCAuggaagaagguucuucc caguug  a
       ||||||||||||| |||||||||||||||||||| ||||||   
       agaaggugcucua cguaccuUCUUCCAAGAAGG GUCAAu  c
------a             c                    C      ua 

Annotation confidence Low

Genome context

chr10: 11249866-11249961 [-]

Mature gma-miR4365-5p

• Accession: MIMAT0018264
• Description: Glycine max gma-miR4365-5p mature miRNA
• Sequence: 1 - AAGAACUUCUUCCGCGAGAUCGCA - 24
• Evidence: experimental ; Illumina [1]

Mature gma-miR4365-3p

• Accession: MIMAT0054096
• Description: Glycine max gma-miR4365-3p mature miRNA
• Sequence: 56 - AACUGCGGAAGAACCUUCU - 74
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14