Dead hairpin entry

Stem-loop gma-MIR1520o

Accession

MI0016537

Description

Glycine max gma-MIR1520o precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1520o
(2 sentences)

Sequence

11331 reads, 36.0 reads per million, 176 experiments

uuacaaaagaauauugauugucaugugucacauucugAUUGGAUGAUAACUGUCAuguguuagguuuugauuuaauauugacucuauggacgaugaaaauguauuguuguugucaacguucaauuagaacgugacaugugauugUCAUCGUCCAAUCAGAAUGUGACAugugacagucaacauucuuuuguaa
.(((((((((((.((((((((((((((((((((((((((((((((((.((.(((((((((((.(((((((((.(((.(((((......(((((((......)))))))...))))).))).))))))))).))))))))))).)).)))))))))))))))))))))))))))))))))).))))))))))).

Structure

u           a                                  A  U           g         u   a     ucuaug       aa 
 uacaaaagaau uugauugucaugugucacauucugAUUGGAUGAU AC GUCAuguguua guuuugauu aau uugac      gacgaug  a
 ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||| |||||      |||||||   
 auguuuucuua aacugacaguguACAGUGUAAGACUAACCUGCUA Ug uaguguacagu caagauuaa uug aacug      uuguuau  a
a           c                                  C  u           g         c   c     ---uug       gu