Stem-loop gma-MIR4343a

Accession

MI0016472

Description

Glycine max gma-MIR4343a precursor miRNA

Sequence

25994 reads, 100.0 reads per million, 178 experiments

auccguauuguucuguAAAAAACUUACGGAUCAAGUUGAUuuguaaaaggcuuacgaAUCAACUUGAUCCGUAAGccuuuuacaaaacaauaccgau
(((.((((((((.(((((((..((((((((((((((((((((((((.....))))))))))))))))))))))))..))))))).)))))))).)))

Structure

   c        c       AA                        a 
auc guauuguu uguAAAA  CUUACGGAUCAAGUUGAUuuguaa a
||| |||||||| |||||||  |||||||||||||||||||||||| g
uag cauaacaa acauuuu  GAAUGCCUAGUUCAACUAagcauu g
   c        a       cc                        c 

Annotation confidence Low

Genome context

chr15: 18637694-18637790 [-]

Mature gma-miR4343a-5p

• Accession: MIMAT0018231
• Description: Glycine max gma-miR4343a-5p mature miRNA
• Sequence: 17 - AAAAAACUUACGGAUCAAGUUGAU - 40
• Evidence: experimental ; Illumina [1]

Mature gma-miR4343a-3p

• Accession: MIMAT0054066
• Description: Glycine max gma-miR4343a-3p mature miRNA
• Sequence: 58 - AUCAACUUGAUCCGUAAG - 75
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14