Stem-loop gma-MIR4380b

Accession

MI0016528

Description

Glycine max gma-MIR4380b precursor miRNA

Literature search

1 open access papers mention gma-MIR4380b
(1 sentences)

Sequence

4251 reads, 15.0 reads per million, 164 experiments

gcguacggaucaaCAAUCCGUAUGAACCAUAuggauuggcaauccgUAUGGUCAUACGGAUUGUUGAUccguacgu
(((((((((((((((((((((((((.(((((((((((...))))))))))))))))))))))))))))))))))))

Structure

                         A           g 
gcguacggaucaaCAAUCCGUAUGA CCAUAuggauu  
||||||||||||||||||||||||| ||||||||||| g
ugcaugccUAGUUGUUAGGCAUACU GGUAUgccuaa  
                         -           c 

Annotation confidence Low

Genome context

chr19: 4425779-4425854 [+]

Mature gma-miR4380b-5p

• Accession: MIMAT0054116
• Description: Glycine max gma-miR4380b-5p mature miRNA
• Sequence: 14 - CAAUCCGUAUGAACCAUA - 31
• Evidence: experimental ; unknown

Mature gma-miR4380b-3p

• Accession: MIMAT0018287
• Description: Glycine max gma-miR4380b-3p mature miRNA
• Sequence: 47 - UAUGGUCAUACGGAUUGUUGAU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14