Stem-loop gma-MIR4398

Accession

MI0016555

Description

Glycine max gma-MIR4398 precursor miRNA

Sequence

6601 reads, 20.0 reads per million, 170 experiments

gacuaaAUUUUGUAUUUUCAUCUUUcagugacgcauuUGUCAGCGGAGUGAGAAGACGAAAaguc
((((...((((((.(((((((..(((..((((......))))..)))))))))).))))))))))

Structure

    aaA      A       CU   ag    gc 
gacu   UUUUGU UUUUCAU  UUc  ugac  a
||||   |||||| |||||||  |||  ||||   
cuga   AAAGCA AAGAGUG  AGG  ACUG  u
    ---      G       --   CG    Uu 

Annotation confidence Low

Genome context

chr1: 44037488-44037552 [+]

Mature gma-miR4398-5p

• Accession: MIMAT0054140
• Description: Glycine max gma-miR4398-5p mature miRNA
• Sequence: 7 - AUUUUGUAUUUUCAUCUUU - 25
• Evidence: experimental ; unknown

Mature gma-miR4398-3p

• Accession: MIMAT0018314
• Description: Glycine max gma-miR4398-3p mature miRNA
• Sequence: 38 - UGUCAGCGGAGUGAGAAGACGAAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14