Dead hairpin entry

Stem-loop gma-MIR1520k

Accession

MI0016532

Description

Glycine max gma-MIR1520k precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1520k
(2 sentences)

Sequence

59300 reads, 177.0 reads per million, 176 experiments

uucuuauuggaugaugauugUCACGUGUCAUGUUCUGAUUagucaaugaaaacagcaauguauuucaucuuucaugguguugacauccAAUCAGAACAUGACACAUGACAGUcaucaaccaauaagaa
.(((((((((.((((((((((((.((((((((((((((((.(((((((((((((....))).))))(((......)))))))))....)))))))))))))))).)))))))))))).))))))))).

Structure

u         a            C                ---a      ------------    -   g 
 ucuuauugg ugaugauugUCA GUGUCAUGUUCUGAUU    gucaau            gaaa aca c
 ||||||||| |||||||||||| ||||||||||||||||    ||||||            |||| |||  
 agaauaacc acuacUGACAGU CACAGUACAAGACUAA    caguug            cuuu ugu a
a         a            A                ccua      ugguacuuucua    a   a