miRBase entry: 20037610

Evolutionary flux of canonical microRNAs and mirtrons in Drosophila

PubMed ID 20037610
Authors "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
Journal "Nat Genet
Volume 42
Pages 6-9

There are 222 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
dps-mir-308 MI0001353 None 3 16337007 16337068 - -
dsi-mir-312 MI0009440 None chr2R 15132849 15132914 - -
dsi-mir-31b MI0009444 None chrX 7083968 7084094 - -
dsi-mir-6-2 MI0009473 None chr2R 14253809 14253882 - -
dsi-mir-318 MI0009474 None chr3R 15159157 15159224 - -
dme-mir-2279 MI0011289 36 chr2R 2552170 2552282 - High
dme-mir-307b MI0011577 46 chr2R 9621234 9621353 + -
dme-mir-2489 MI0011578 24 chr2L 13609974 13610068 + -
dme-mir-2490 MI0011579 39 chr2L 23168825 23168899 + -
dme-mir-2491 MI0011580 22 chrX 22833440 22833583 - -
dme-mir-2492 MI0011581 19 chrX 11547422 11547497 + -
dme-mir-2493 MI0011582 20 chr3R 15130754 15130859 - -
dme-mir-2494 MI0011583 72 chr3R 16618766 16618882 + High
dme-mir-2495 MI0011584 11 chr2L 5068570 5068684 + -
dme-mir-2496 MI0011585 37 chrX 2010300 2010417 + -
dme-mir-2497 MI0011586 42 chr2L 16678240 16678335 + -
dme-mir-2498 MI0011587 156 chr2R 20584709 20584820 - High
dme-mir-2499 MI0011588 108 chrX 19557008 19557103 + -
dme-mir-2500 MI0011589 49 chr3L 16998457 16998524 - -
dme-mir-2501 MI0011590 30 chr3L 8111107 8111177 + -
dps-mir-989 MI0011591 None 3 2729300 2729419 - -
dps-mir-981 MI0011592 None XL_group1a 4258928 4259016 - -
dps-mir-970 MI0011593 None XL_group1a 3316436 3316523 + -
dps-mir-980 MI0011594 None XL_group1e 4097649 4097756 - -
dps-mir-971 MI0011595 None XL_group3a 1391627 1391720 - -
dps-mir-190 MI0011596 None XR_group3a 147703 147796 - -
dps-mir-957 MI0011597 None XR_group8 186485 186581 - -
dps-mir-958 MI0011598 None XR_group8 344180 344279 - -
dps-mir-988 MI0011599 None 3 405638 405742 - -
dps-mir-987 MI0011600 None 3 9267906 9268018 - -
dps-mir-137 MI0011601 None 3 16385895 16386005 - -
dps-mir-994 MI0011602 None 2 7233495 7233601 - -
dps-mir-311 MI0011603 None 3 8679717 8679827 + -
dps-mir-92c MI0011604 None 3 8679866 8679980 + -
dps-mir-968 MI0011605 None 4_group1 1722779 1722895 + -
dps-mir-1002 MI0011606 None 4_group1 1722916 1723031 + -
dps-mir-965 MI0011607 None 4_group1 4362162 4362252 + -
dps-mir-1006 MI0011608 None 4_group3 3057661 3057742 + -
dps-mir-375 MI0011609 None 4_group3 5649122 5649210 + -
dps-mir-964 MI0011610 None 4_group4 3181504 3181621 - -
dps-mir-959 MI0011611 None 4_group4 3182613 3182724 - -
dps-mir-932 MI0011612 None 4_group5 397108 397225 + -
dps-mir-252 MI0011613 None 2 16736620 16736729 - -
dps-mir-993 MI0011614 None 2 19773790 19773903 - -
dps-mir-1000 MI0011615 None 2 21158172 21158262 - -
dps-mir-929 MI0011616 None 2 24810847 24810940 - -
dps-mir-927 MI0011617 None Unknown_group_79 17452 17539 + -
dps-mir-995 MI0011618 None 2 5900279 5900363 + -
dps-mir-1010 MI0011619 None 2 12275931 12276036 + -
dps-mir-969 MI0011620 None XL_group3a 1977493 1977604 - -
dps-mir-193 MI0011621 None XR_group6 2746050 2746151 - -
dps-mir-986 MI0011622 None 3 2308620 2308711 + -
dps-mir-307b MI0011623 None 3 14135704 14135788 + -
dps-mir-3983 MI0011624 None 4_group3 7322805 7322892 - -
dps-mir-210b MI0011625 None XL_group3a 1970510 1970618 + -
dps-mir-iab-8 MI0011626 None 2 17671755 17671847 - -
dps-mir-2502 MI0011627 None 2 16637948 16638059 - -
dps-mir-2503 MI0011628 None 2 17318675 17318788 - -
dps-mir-2504 MI0011629 None 2 23586051 23586130 + -
dps-mir-2505 MI0011630 None 2 25756787 25756870 + -
dps-mir-2506 MI0011631 None 3 8680187 8680303 + -
dps-mir-2507a MI0011632 None 3 8680507 8680614 + -
dps-mir-2508 MI0011633 None 4_group3 4282795 4282901 - -
dps-mir-276c MI0011634 None 4_group4 3170500 3170615 - -
dps-mir-2509 MI0011635 None 4_group4 3182231 3182330 - -
dps-mir-2510 MI0011636 None 4_group4 3551345 3551451 + -
dps-mir-2511-1 MI0011637 None 4_group4 3552536 3552652 + -
dps-mir-2511-2 MI0011638 None 4_group4 3554138 3554224 + -
dps-mir-2512 MI0011639 None Unknown_group_138 13967 14063 - -
dps-mir-2513a MI0011640 None Unknown_group_64 7644 7763 - -
dps-mir-2514 MI0011641 None Unknown_group_258 6689 6768 - -
dps-mir-2515 MI0011642 None Unknown_singleton_3915 296 406 - -
dps-mir-2518-3 MI0011643 None Unknown_group_82 18123 18227 + -
dps-mir-2518-2 MI0011644 None Unknown_group_82 14041 14132 + -
dps-mir-2518-4 MI0011645 None Unknown_group_95 5483 5587 + -
dps-mir-2513b MI0011646 None Unknown_group_64 7644 7763 + -
dps-mir-2516 MI0011647 None Unknown_group_304 5619 5695 + -
dps-mir-2517-4 MI0011648 None None None -
dps-mir-2518-1 MI0011649 None Unknown_singleton_1205 540 629 + -
dps-mir-2574b MI0011650 None Unknown_singleton_1172 1127 1194 + -
dps-mir-2528-2 MI0011651 None Unknown_singleton_1587 1510 1627 + -
dps-mir-2519 MI0011652 None XL_group1e 8341045 8341162 - -
dps-mir-2520 MI0011653 None XL_group1e 8362599 8362718 - -
dps-mir-2521 MI0011654 None XL_group1e 8362756 8362842 - -
dps-mir-2522a MI0011655 None XL_group1e 8365900 8366011 - -
dps-mir-2523 MI0011656 None XL_group1e 8366995 8367108 - -
dps-mir-2524 MI0011657 None XL_group1e 8376659 8376751 - -
dps-mir-2525 MI0011658 None XR_group8 4634865 4634975 - -
dps-mir-2526 MI0011659 None XL_group1a 7530704 7530809 + -
dps-mir-2545b MI0011660 None XL_group1e 1656606 1656722 + -
dps-mir-2527 MI0011661 None XL_group1e 10071219 10071338 + -
dps-mir-2528-1 MI0011662 None 2 24581194 24581311 + -
dps-mir-2529 MI0011663 None 3 10934590 10934702 + -
dps-mir-2530 MI0011664 None 3 11520725 11520818 + -
dps-mir-2531 MI0011665 None Unknown_group_271 1068 1182 - -
dps-mir-2532 MI0011666 None Unknown_singleton_2799 7924 8031 - -
dps-mir-2533 MI0011667 None Unknown_singleton_3388 114 225 - -
dps-mir-2534 MI0011668 None Unknown_singleton_1773 896 1012 - -
dps-mir-2535 MI0011669 None XL_group1a 9058674 9058793 + -
dps-mir-2536 MI0011670 None XL_group1e 8362342 8362452 - -
dps-mir-2537 MI0011671 None XL_group1e 8362508 8362587 - -
dps-mir-2538 MI0011672 None XL_group1e 8363244 8363359 - -
dps-mir-2522b MI0011673 None XL_group1e 8363413 8363514 - -
dps-mir-2539 MI0011674 None XL_group1e 8366678 8366788 - -
dps-mir-2540 MI0011675 None XL_group1e 8367333 8367441 - -
dps-mir-2541 MI0011676 None XL_group1e 8367679 8367786 - -
dps-mir-2542-1 MI0011677 None XL_group1e 8373614 8373698 - -
dps-mir-2517-1 MI0011678 None Unknown_singleton_1920 1593 1697 + -
dps-mir-2543a-1 MI0011679 None Unknown_singleton_1920 1437 1552 + -
dps-mir-2542-2 MI0011680 None XL_group1e 8376961 8377045 - -
dps-mir-2517-2 MI0011681 None XL_group1e 8378028 8378132 - -
dps-mir-2543b-2 MI0011682 None XL_group1e 8378173 8378288 - -
dps-mir-2542-3 MI0011683 None XL_group1e 8378579 8378663 - -
dps-mir-2544 MI0011684 None XL_group1e 8378925 8379029 - -
dps-mir-2543b-1 MI0011686 None XL_group1e 8380575 8380690 - -
dps-mir-2545a MI0011687 None XL_group1e 1655246 1655363 + -
dps-mir-2546 MI0011688 None XL_group1e 5401255 5401338 + -
dps-mir-2547 MI0011689 None XL_group3a 1376512 1376597 - -
dps-mir-2548 MI0011690 None XL_group3a 1435995 1436092 - -
dps-mir-2549 MI0011691 None XR_group8 1815816 1815931 + -
dps-mir-2550 MI0011692 None 3 18373452 18373563 - -
dps-mir-2551 MI0011693 None 3 8678482 8678601 + -
dps-mir-2552 MI0011694 None 3 8679230 8679342 + -
dps-mir-2553 MI0011695 None 3 8680021 8680129 + -
dps-mir-2554 MI0011696 None 3 8680335 8680451 + -
dps-mir-2507b MI0011697 None 3 8680663 8680779 + -
dps-mir-2555 MI0011698 None 3 16364035 16364096 + -
dps-mir-2556 MI0011699 None 3 16971285 16971390 + -
dps-mir-2557 MI0011700 None 2 951085 951176 - -
dps-mir-2558-1 MI0011701 None 4_group1 2593451 2593534 - -
dps-mir-2558-2 MI0011702 None 4_group1 2598280 2598373 - -
dps-mir-2559 MI0011703 None 4_group3 4962040 4962148 - -
dps-mir-2560 MI0011704 None 4_group3 4018595 4018711 + -
dps-mir-2561 MI0011705 None 4_group3 8461799 8461901 + -
dps-mir-2562 MI0011706 None 4_group4 697493 697556 - -
dps-mir-2563 MI0011707 None 4_group4 3182462 3182572 - -
dps-mir-2564 MI0011708 None 4_group4 1639565 1639673 + -
dps-mir-2565 MI0011709 None 4_group4 3528465 3528567 + -
dps-mir-2566a-1 MI0011710 None 4_group4 3552319 3552402 + -
dps-mir-2567a MI0011711 None 4_group4 3552872 3552956 + -
dps-mir-2566a-2 MI0011712 None 4_group4 3553033 3553118 + -
dps-mir-2567c MI0011713 None 4_group4 3553417 3553521 + -
dps-mir-2566b MI0011714 None 4_group4 3553900 3553982 + -
dps-mir-2567b MI0011715 None 4_group4 3554452 3554536 + -
dps-mir-2568a MI0011716 None 4_group5 2212324 2212411 - -
dps-mir-2569 MI0011717 None 4_group5 2250946 2251036 - -
dps-mir-2568b MI0011718 None 4_group5 2251087 2251206 - -
dps-mir-2570 MI0011719 None Unknown_group_377 23153 23255 - -
dps-mir-2571 MI0011720 None 2 26718388 26718459 - -
dps-mir-2572 MI0011721 None 2 11377 11466 + -
dps-mir-2573 MI0011722 None Unknown_group_277 16532 16611 + -
dps-mir-2574a MI0011723 None Unknown_group_61 9898 10010 + -
dps-mir-2543a-2 MI0011724 None XL_group1e 8373978 8374093 - -
dps-mir-2517-3 MI0011725 None XL_group1e 8380430 8380532 - -
dps-mir-2575 MI0011726 None 2 14879908 14880027 + -
dps-mir-2576-1 MI0011727 None Unknown_group_319 10719 10838 + -
dps-mir-2576-2 MI0011728 None Unknown_singleton_2064 6689 6808 + -
dsi-mir-977 MI0011729 None chrX 15018634 15018748 + -
dsi-mir-978a MI0011730 None None None -
dsi-mir-1012 MI0011731 None chr3R 22517514 22517607 - -
dsi-mir-1003 MI0011732 None chr3R 20323140 20323229 + -
dsi-mir-991 MI0011733 None chr2R 15134391 15134508 - -
dsi-mir-986 MI0011734 None chr2R 2956853 2956966 + -
dsi-mir-987 MI0011735 None chr2R 3860406 3860494 - -
dsi-mir-988 MI0011736 None None None -
dsi-mir-967 MI0011737 None chr2L 12267932 12268031 - -
dsi-mir-1002 MI0011738 None chr2L 13506522 13506624 - -
dsi-mir-968 MI0011739 None chr2L 13506683 13506780 - -
dsi-mir-1006 MI0011740 None chr2L 16422877 16422979 - -
dsi-mir-958 MI0011741 None chr3L 21947681 21947773 - -
dsi-mir-955 MI0011742 None chr3L 2834569 2834683 + -
dsi-mir-190 MI0011743 None chr3L 8005923 8006011 + -
dsi-mir-193 MI0011744 None chr3L 20903317 20903436 + -
dsi-mir-995 MI0011745 None chr3R 4901724 4901843 - -
dsi-mir-999 MI0011746 None chr3R 17429603 17429703 - -
dsi-mir-1000 MI0011747 None chr3R 21243642 21243761 - -
dsi-mir-929 MI0011748 None chr3R 194544 194661 + -
dsi-mir-993 MI0011749 None chr3R 2632935 2633048 + -
dsi-mir-1010 MI0011750 None chr3R 17925959 17926078 + -
dsi-mir-252 MI0011751 None None None -
dsi-mir-1005 MI0011752 None chr2L 4265528 4265647 + -
dsi-mir-961 MI0011753 None chr2L 5434266 5434376 + -
dsi-mir-965 MI0011754 None chr2L 248267 248357 - -
dsi-mir-963 MI0011755 None chr2L 5435040 5435157 + -
dsi-mir-964 MI0011756 None chr2L 5435195 5435286 + -
dsi-mir-932 MI0011757 None chr2L 6697531 6697630 + -
dsi-mir-969 MI0011758 None None None -
dsi-mir-980 MI0011759 None chrX 118268 118370 - -
dsi-mir-927 MI0011760 None chrX 12269414 12269505 - -
dsi-mir-981 MI0011761 None None None -
dsi-mir-970 MI0011762 None None None -
dsi-mir-375 MI0011763 None None None -
dsi-mir-992 MI0011764 None chr2R 15134519 15134598 - -
dsi-mir-137 MI0011765 None chr2R 10688346 10688455 - -
dsi-mir-960 MI0011766 None chr2L 5434148 5434244 + -
dsi-mir-962 MI0011767 None chr2L 5434384 5434477 + -
dsi-mir-989 MI0011768 None chr2R 8799023 8799104 - -
dsi-mir-957 MI0011769 None chr3L 21812311 21812424 - -
dsi-mir-1013 MI0011770 None chr3R 26257480 26257587 - -
dsi-mir-1011 MI0011771 None chr3R 4780978 4781057 + -
dsi-mir-975 MI0011772 None chrX 15018370 15018489 + -
dsi-mir-976 MI0011773 None chrX 15018508 15018600 + -
dsi-mir-978b MI0011774 None None None -
dsi-mir-iab-8 MI0011775 None chr3R 8791201 8791300 + -
dsi-mir-1001 MI0011776 None None None -
dsi-mir-959 MI0011777 None chr2L 5434030 5434121 + -
dsi-mir-2577 MI0011778 None chr2L 14256237 14256350 - -
dsi-mir-2489 MI0011779 None chr2L 13379254 13379348 + -
dsi-mir-2578 MI0011780 None chr3R 2215089 2215153 - -
dsi-mir-2579 MI0011781 None chr3R 19334301 19334377 + -
dsi-mir-982c MI0011782 None chrX 3273520 3273624 - -
dsi-mir-982b MI0011783 None chrX 3273921 3274024 - -
dsi-mir-982a MI0011784 None chrX 3274561 3274652 - -
dsi-mir-303 MI0011785 None chrX 3275250 3275335 - -
dsi-mir-2580 MI0011786 None chrX 8789486 8789597 + -
dsi-mir-2581 MI0011787 None None None -
dsi-mir-2582a MI0011788 None chrX 3274401 3274516 - -
dsi-mir-2494 MI0011789 None chr3R 9022602 9022714 - -
dsi-mir-2582b MI0011790 None chrX 3273790 3273868 - -
dsi-mir-983a MI0011791 None chrX 3277334 3277453 - -
dsi-mir-2583 MI0011792 None chrX 5118687 5118768 + -
dsi-mir-2584 MI0011793 None chr2R 8829630 8829743 + -



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