Stem-loop dsi-mir-959

Accession

MI0011777

Description

Drosophila simulans dsi-mir-959 precursor miRNA

Gene family

MIPF0000910; mir-959

Sequence

cuuuguucuauauucuuaguacucggguugauaaagaccuuuucuuugcggagccuUUGUCAUCGGGGGUAUUAUGAAauauaguuuaaaga
(((((..((((((((.((((((((....((((((((.((..........))...))))))))....)))))))).).)))))))..))))).

Structure

-     uu       - u        gggu        --a  uuuu 
 cuuug  cuauauu c uaguacuc    ugauaaag   cc    c
 |||||  ||||||| | ||||||||    ||||||||   ||     
 gaaau  gauauaA G AUUAUGGG    ACUGUUuc   gg    u
a     uu       A U        GGCU        cga  cguu 

Annotation confidence Not enough data

Genome context

chr2L: 5434030-5434121 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from dsi-mir-959

Mature dsi-miR-959

• Accession: MIMAT0012508
• Description: Drosophila simulans dsi-miR-959 mature miRNA
• Sequence: 57 - UUGUCAUCGGGGGUAUUAUGAA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9