Stem-loop dps-mir-2565

Accession

MI0011709

Description

Drosophila pseudoobscura dps-mir-2565 precursor miRNA

Sequence

agcugcgaccaaaugagGUGAAAUUUAUUUAUAGGCAGAaaauauuuauuccgcucgauggauaauaucucUUCCUGUAUCUGAUUUUCAGacuggcgucguu
.((.(((.(((.......(((((.(((..((((((.(((..(((((...((((.....)))).))))).))).))))))..))).)))))...)))))).)).

Structure

a  u   a   aaugagG     U   UU      C   aa     uau    c 
 gc gcg cca       UGAAA UUA  UAUAGG AGA  auauu   uccg u
 || ||| |||       ||||| |||  |||||| |||  |||||   |||| c
 ug ugc ggu       ACUUU AGU  AUGUCC Ucu  uauaa   aggu g
u  c   -   ----caG     U   CU      U   -c     --u    a 

Annotation confidence Not enough data

Genome context

4_group4: 3528465-3528567 [+]

Mature dps-miR-2565-5p

• Accession: MIMAT0012392
• Description: Drosophila pseudoobscura dps-miR-2565-5p mature miRNA
• Sequence: 18 - GUGAAAUUUAUUUAUAGGCAGA - 39
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2565-3p

• Accession: MIMAT0012393
• Description: Drosophila pseudoobscura dps-miR-2565-3p mature miRNA
• Sequence: 72 - UUCCUGUAUCUGAUUUUCAG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9