Stem-loop dsi-mir-2580

Accession

MI0011786

Description

Drosophila simulans dsi-mir-2580 precursor miRNA

Sequence

agcagcagcagcagcaacagcaucacacauacauacacacgcgggcauuuuuucgggccucucuuggcgcgCGUGUCUGUGUGUAUGUUGCAGuugcauaguuuuugcuucu
((.(((((.(((.(((((.(((....(((((((((((.(((((.((..........(((......))))).))))).)))))))))))))).)))))...))).))))).))

Structure

  c     c   --a     a   ucac           c     g  auuuuuucgg   uc 
ag agcag agc   gcaac gca    acauacauaca acgcg gc          gcc  u
|| ||||| |||   ||||| |||    ||||||||||| ||||| ||          |||   
uc ucguu uug   cguuG CGU    UGUAUGUGUGU UGUGC cg          cgg  c
  u     u   aua     A   ----           C     g  ----------   uu 

Annotation confidence Not enough data

Genome context

chrX: 8789486-8789597 [+]

Mature dsi-miR-2580

• Accession: MIMAT0012517
• Description: Drosophila simulans dsi-miR-2580 mature miRNA
• Sequence: 72 - CGUGUCUGUGUGUAUGUUGCAG - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9