miRBase entry: dps-mir-2502

Stem-loop dps-mir-2502


Accession
MI0011627
Description
Drosophila pseudoobscura dps-mir-2502 precursor miRNA


Sequence

gcugcaacaacggcaggcggcggcaacgGCGGCAGCGCCAGCAACAGCUagaguuauaggacagcugcugccgaugcugcugccgcugcugcugcccaaacggaauugcagu
(((((((...((...((((((((((.(((((((((((.(.(((.(((((...(((....)))))))).))).).))))))))))).))))))))))....))...)))))))

Structure
       caa  -gca          a           C A   A     aga   a 
gcugcaa   cg    ggcggcggca cgGCGGCAGCG C GCA CAGCU   guu u
|||||||   ||    |||||||||| ||||||||||| | ||| |||||   |||  
ugacguu   gc    ccgucgucgu gccgucgucgu g cgu gucga   cag a
       aag  aaac          c           a c   c     ---   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
2: 16637948-16638059 [-]

Database links

Mature dps-miR-2502

Accession MIMAT0012286
Description Drosophila pseudoobscura dps-miR-2502 mature miRNA
Sequence 29 - GCGGCAGCGCCAGCAACAGCU - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9