Stem-loop dsi-mir-991

Accession

MI0011733

Description

Drosophila simulans dsi-mir-991 precursor miRNA

Sequence

ggguauaucaaaaauaucacugcaguuucaggcuuUUCCCAACUACAUCUAUUAAUAUuuauuuuaacgucguaUUAAAGUUGAAGUUUGGAAAAUuuugguuuugcauuugaaaucc
((((...(((((........(((((..(((((.((((((.((((.((.((.(((((((.............))))))))).)).)))).)))))).)))))..)))))))))).))))

Structure

    aua     aauaucac     uu     c      C    A  U  A       uuauu 
gggu   ucaaa        ugcag  ucagg uuUUCC AACU CA CU UUAAUAU     u
||||   |||||        |||||  ||||| |||||| |||| || || |||||||     u
ccua   aguuu        acguu  gguuu AAAAGG UUGA GU GA AAUUaug     a
    --a     --------     uu     U      U    A  U  -       cugca 

Annotation confidence Not enough data

Genome context

chr2R: 15134391-15134508 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from dsi-mir-991

Mature dsi-miR-991-5p

• Accession: MIMAT0012429
• Description: Drosophila simulans dsi-miR-991-5p mature miRNA
• Sequence: 36 - UUCCCAACUACAUCUAUUAAUAU - 58
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-991-3p

• Accession: MIMAT0012430
• Description: Drosophila simulans dsi-miR-991-3p mature miRNA
• Sequence: 75 - UUAAAGUUGAAGUUUGGAAAAU - 96
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250