Stem-loop dsi-mir-1003

Accession

MI0011732

Description

Drosophila simulans dsi-mir-1003 precursor miRNA

Gene family

MIPF0000923; mir-1003

Sequence

gcacugaagcugcgcagaagGUGGGUAUCUGGAUGUGGUUGGcucuggcgguccUCUCACAUUUACAUAUUCACAGgcgccgugagcugc
(((((...((.((((.....((((((((.(((((((((..((((.....))))..).)))))))).))))))))..)))).)).)).)))

Structure

   -  gaa  u    agaag        C        - UU    c 
gca cu   gc gcgc     GUGGGUAU UGGAUGUG G  GGcu u
||| ||   || ||||     |||||||| |||||||| |  |||| g
cgu ga   ug cgcg     CACUUAUA AUUUACAC C  cugg g
   c  --g  c    ---GA        C        U Uc    c 

Annotation confidence Not enough data

Genome context

chr3R: 20323140-20323229 [+]

Mature dsi-miR-1003-5p

• Accession: MIMAT0012427
• Description: Drosophila simulans dsi-miR-1003-5p mature miRNA
• Sequence: 21 - GUGGGUAUCUGGAUGUGGUUGG - 42
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-1003-3p

• Accession: MIMAT0012428
• Description: Drosophila simulans dsi-miR-1003-3p mature miRNA
• Sequence: 55 - UCUCACAUUUACAUAUUCACAG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9