Stem-loop dps-mir-190

Accession

MI0011596

Description

Drosophila pseudoobscura dps-mir-190 precursor miRNA

Sequence

auuggggauuccagugAGAUAUGUUUGAUAUUCUUGGUUGuuacauucaagaguucaCCCAGGAAUCAAACAUAUUAUUAcugugauacccgga
.((.(((..((((((((((((((((((((..((((((.((..((........)).)).)))))))))))))))))).)))))).))..))).))

Structure

a  g   au  -      -            AU      U  uu  auu 
 uu ggg  uc cagugA GAUAUGUUUGAU  UCUUGG UG  ac   c
 || |||  || |||||| ||||||||||||  |||||| ||  ||    
 ag ccc  ag gucAUU UUAUACAAACUA  AGGACC ac  ug   a
-  g   au  u      A            --      C  -u  aga 

Annotation confidence Not enough data

Genome context

XR_group3a: 147703-147796 [-]

Mature dps-miR-190-5p

• Accession: MIMAT0012227
• Description: Drosophila pseudoobscura dps-miR-190-5p mature miRNA
• Sequence: 17 - AGAUAUGUUUGAUAUUCUUGGUUG - 40
• Evidence: experimental ; Illumina [1]

Mature dps-miR-190-3p

• Accession: MIMAT0012228
• Description: Drosophila pseudoobscura dps-miR-190-3p mature miRNA
• Sequence: 58 - CCCAGGAAUCAAACAUAUUAUUA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9