Stem-loop dsi-mir-977

Accession

MI0011729

Description

Drosophila simulans dsi-mir-977 precursor miRNA

Sequence

agugccgaaaaugcaucccaagguaugguuUAGAUAACUCGAAUAUCACAUUUUcaguguucgauaucugaUGAGAUAUUCACGUUGUCUAAaccaugguuuguuuuugaaaacu
.((((.......))))..((((.(((((((((((((((..(((((((.((...((((..........)))))).)))))))..))))))))))))))).))))............

Structure

agugccgaaaaugcaucc    g               UC       A  UUU    uguu 
                  caag uaugguuUAGAUAAC  GAAUAUC CA   Ucag    c
                  |||| |||||||||||||||  ||||||| ||   ||||     
                  guuu guaccaAAUCUGUUG  CUUAUAG GU   aguc    g
------ucaaaaguuuuu    g               CA       A  ---    uaua 

Annotation confidence Not enough data

Genome context

chrX: 15018634-15018748 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-977

Mature dsi-miR-977-3p

• Accession: MIMAT0012423
• Description: Drosophila simulans dsi-miR-977-3p mature miRNA
• Sequence: 72 - UGAGAUAUUCACGUUGUCUAA - 92
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-977-5p

• Accession: MIMAT0037354
• Description: Drosophila simulans dsi-miR-977-5p mature miRNA
• Sequence: 31 - UAGAUAACUCGAAUAUCACAUUUU - 54
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250