miRBase entry: dps-mir-193

Stem-loop dps-mir-193


Accession
MI0011621
Description
Drosophila pseudoobscura dps-mir-193 precursor miRNA


Sequence

ugcacccauuauAGUUGGGAUUUUUUAGAUCAGCAGuuauugcuauacagccguauuaauaaaucuucUACUGGCCUACUAAGUCCCAACauaaugagagua
(((.(.((((((.((((((((((..(((.((((.((((((((..((((....)))))))))).....)).)))).)))..)))))))))))))))).).)))

Structure
   a c      A          UU   A    C  -----      cu    a 
ugc c cauuau GUUGGGAUUU  UAG UCAG AG     uuauug  auac g
||| | |||||| ||||||||||  ||| |||| ||     ||||||  ||||  
aug g guaaua CAACCCUGAA  AUC GGUC Uc     aauaau  uaug c
   a a      -          UC   C    A  uucua      --    c 


Annotation confidence Not enough data
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Genome context
XR_group6: 2746050-2746151 [-]

Database links

Mature dps-miR-193-5p

Accession MIMAT0012277
Description Drosophila pseudoobscura dps-miR-193-5p mature miRNA
Sequence 13 - AGUUGGGAUUUUUUAGAUCAGCAG - 36
Evidence experimental
Illumina [1]

Mature dps-miR-193-3p

Accession MIMAT0012278
Description Drosophila pseudoobscura dps-miR-193-3p mature miRNA
Sequence 69 - UACUGGCCUACUAAGUCCCAAC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9